Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 LSM12P1-201ENST00000411836 588 ntBASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 AC005829.2-201ENST00000571422 1056 ntBASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 REXO1L9P-201ENST00000604264 2108 ntBASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 MTMR9LP-203ENST00000426597 1545 ntBASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 SLC25A6P5-201ENST00000435663 894 ntBASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 RPS2P52-201ENST00000469610 820 ntBASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 AC087623.3-201ENST00000607047 1098 ntBASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CNIH3Q8TBE1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.06■□□□□ 0.32
CNIH3Q8TBE1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNIH3Q8TBE1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CNIH3Q8TBE1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNIH3Q8TBE1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.06■□□□□ 0.32
CNIH3Q8TBE1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CNIH3Q8TBE1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNIH3Q8TBE1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CNIH3Q8TBE1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNIH3Q8TBE1 TSPY21P-201ENST00000433481 731 ntBASIC17.06■□□□□ 0.32
CNIH3Q8TBE1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.06■□□□□ 0.32
CNIH3Q8TBE1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.06■□□□□ 0.32
CNIH3Q8TBE1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.06■□□□□ 0.32
CNIH3Q8TBE1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNIH3Q8TBE1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.06■□□□□ 0.32
CNIH3Q8TBE1 AC108860.2-201ENST00000562760 2183 ntBASIC17.06■□□□□ 0.32
CNIH3Q8TBE1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.06■□□□□ 0.32
CNIH3Q8TBE1 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.06■□□□□ 0.32
CNIH3Q8TBE1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNIH3Q8TBE1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNIH3Q8TBE1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNIH3Q8TBE1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.05■□□□□ 0.32
CNIH3Q8TBE1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNIH3Q8TBE1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNIH3Q8TBE1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNIH3Q8TBE1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CNIH3Q8TBE1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CNIH3Q8TBE1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNIH3Q8TBE1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNIH3Q8TBE1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNIH3Q8TBE1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNIH3Q8TBE1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNIH3Q8TBE1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNIH3Q8TBE1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.05■□□□□ 0.32
CNIH3Q8TBE1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms