Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC11.71□□□□□ -0.53
SVIPQ8NHG7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
SVIPQ8NHG7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SVIPQ8NHG7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SVIPQ8NHG7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SVIPQ8NHG7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SVIPQ8NHG7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC11.71□□□□□ -0.53
SVIPQ8NHG7 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
SVIPQ8NHG7 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC11.71□□□□□ -0.53
SVIPQ8NHG7 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SVIPQ8NHG7 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SVIPQ8NHG7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SVIPQ8NHG7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC11.71□□□□□ -0.53
SVIPQ8NHG7 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SVIPQ8NHG7 BPNT1-201ENST00000322067 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SVIPQ8NHG7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC11.71□□□□□ -0.53
SVIPQ8NHG7 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC11.71□□□□□ -0.53
SVIPQ8NHG7 OR6D1P-203ENST00000641209 4860 ntBASIC11.71□□□□□ -0.54
SVIPQ8NHG7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SVIPQ8NHG7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
SVIPQ8NHG7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SVIPQ8NHG7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC11.71□□□□□ -0.54
SVIPQ8NHG7 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
SVIPQ8NHG7 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.54
SVIPQ8NHG7 PTENP1-202ENST00000532280 3996 ntBASIC11.71□□□□□ -0.54
SVIPQ8NHG7 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
SVIPQ8NHG7 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
SVIPQ8NHG7 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SVIPQ8NHG7 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SVIPQ8NHG7 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC11.71□□□□□ -0.54
SVIPQ8NHG7 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
SVIPQ8NHG7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
SVIPQ8NHG7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 TNFAIP3-211ENST00000621150 1613 ntTSL 5 BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 AC007950.2-201ENST00000615045 2347 ntBASIC11.7□□□□□ -0.54
SVIPQ8NHG7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 HGNC:18790-209ENST00000513555 3291 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SVIPQ8NHG7 CYP2T1P-202ENST00000641596 2535 ntBASIC11.69□□□□□ -0.54
SVIPQ8NHG7 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SVIPQ8NHG7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SVIPQ8NHG7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SVIPQ8NHG7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SVIPQ8NHG7 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SVIPQ8NHG7 AL645728.1-201ENST00000366221 2101 ntBASIC11.69□□□□□ -0.54
SVIPQ8NHG7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
SVIPQ8NHG7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SVIPQ8NHG7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SVIPQ8NHG7 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SVIPQ8NHG7 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
SVIPQ8NHG7 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC11.69□□□□□ -0.54
SVIPQ8NHG7 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
SVIPQ8NHG7 AC132872.4-202ENST00000622924 2756 ntBASIC11.69□□□□□ -0.54
SVIPQ8NHG7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SVIPQ8NHG7 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
SVIPQ8NHG7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms