Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 MIR4281-201ENST00000580852 62 ntBASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 AL031602.1-201ENST00000633169 911 ntBASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 AC005052.1-201ENST00000625181 2492 ntBASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC10.27□□□□□ -0.77
SPTSSBQ8NFR3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 AC016575.1-201ENST00000607026 382 ntBASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 AC003102.1-202ENST00000563394 1796 ntBASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 CTBP1-AS2-206ENST00000581398 5652 ntBASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 AC022211.2-201ENST00000585075 2527 ntBASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SPTSSBQ8NFR3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 KRT18P24-201ENST00000344739 1156 ntBASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SPTSSBQ8NFR3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC10.25□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms