Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.14■□□□□ 0.49
HIPK4Q8NE63 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIPK4Q8NE63 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIPK4Q8NE63 AC092437.1-201ENST00000624794 1048 ntBASIC18.14■□□□□ 0.49
HIPK4Q8NE63 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.14■□□□□ 0.49
HIPK4Q8NE63 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIPK4Q8NE63 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HIPK4Q8NE63 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.14■□□□□ 0.49
HIPK4Q8NE63 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HIPK4Q8NE63 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HIPK4Q8NE63 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIPK4Q8NE63 AC104417.2-201ENST00000562989 1793 ntBASIC18.14■□□□□ 0.49
HIPK4Q8NE63 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIPK4Q8NE63 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIPK4Q8NE63 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HIPK4Q8NE63 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
HIPK4Q8NE63 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIPK4Q8NE63 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
HIPK4Q8NE63 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK4Q8NE63 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
HIPK4Q8NE63 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK4Q8NE63 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.13■□□□□ 0.49
HIPK4Q8NE63 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.13■□□□□ 0.49
HIPK4Q8NE63 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK4Q8NE63 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.13■□□□□ 0.49
HIPK4Q8NE63 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK4Q8NE63 CROCCP1-201ENST00000426910 5675 ntBASIC18.13■□□□□ 0.49
HIPK4Q8NE63 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK4Q8NE63 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK4Q8NE63 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK4Q8NE63 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK4Q8NE63 MIR663A-201ENST00000385250 93 ntBASIC18.13■□□□□ 0.49
HIPK4Q8NE63 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK4Q8NE63 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.13■□□□□ 0.49
HIPK4Q8NE63 CDCA4P2-201ENST00000441182 718 ntBASIC18.13■□□□□ 0.49
HIPK4Q8NE63 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK4Q8NE63 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.13■□□□□ 0.49
HIPK4Q8NE63 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.13■□□□□ 0.49
HIPK4Q8NE63 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK4Q8NE63 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK4Q8NE63 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK4Q8NE63 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK4Q8NE63 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK4Q8NE63 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK4Q8NE63 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK4Q8NE63 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK4Q8NE63 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK4Q8NE63 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
HIPK4Q8NE63 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 PCDHA12-202ENST00000613593 2588 ntBASIC18.12■□□□□ 0.49
HIPK4Q8NE63 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 AC026185.1-201ENST00000445748 174 ntBASIC18.12■□□□□ 0.49
HIPK4Q8NE63 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.12■□□□□ 0.49
HIPK4Q8NE63 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 LINC00896-202ENST00000609602 2128 ntBASIC18.12■□□□□ 0.49
HIPK4Q8NE63 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.12■□□□□ 0.49
HIPK4Q8NE63 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.11■□□□□ 0.49
HIPK4Q8NE63 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIPK4Q8NE63 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIPK4Q8NE63 AC134043.2-201ENST00000624206 2238 ntBASIC18.11■□□□□ 0.49
HIPK4Q8NE63 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HIPK4Q8NE63 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIPK4Q8NE63 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIPK4Q8NE63 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.11■□□□□ 0.49
HIPK4Q8NE63 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIPK4Q8NE63 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIPK4Q8NE63 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.11■□□□□ 0.49
HIPK4Q8NE63 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIPK4Q8NE63 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.11■□□□□ 0.49
HIPK4Q8NE63 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.11■□□□□ 0.49
HIPK4Q8NE63 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HIPK4Q8NE63 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.11■□□□□ 0.49
HIPK4Q8NE63 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms