Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 MTMR9LP-203ENST00000426597 1545 ntBASIC16.35■□□□□ 0.21
CPEB3Q8NE35 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CPEB3Q8NE35 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.34■□□□□ 0.21
CPEB3Q8NE35 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPEB3Q8NE35 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPEB3Q8NE35 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPEB3Q8NE35 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.34■□□□□ 0.21
CPEB3Q8NE35 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPEB3Q8NE35 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPEB3Q8NE35 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPEB3Q8NE35 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CPEB3Q8NE35 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.34■□□□□ 0.21
CPEB3Q8NE35 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPEB3Q8NE35 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.34■□□□□ 0.21
CPEB3Q8NE35 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPEB3Q8NE35 MIR4674-201ENST00000582457 87 ntBASIC16.34■□□□□ 0.21
CPEB3Q8NE35 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPEB3Q8NE35 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.34■□□□□ 0.21
CPEB3Q8NE35 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPEB3Q8NE35 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPEB3Q8NE35 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPEB3Q8NE35 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.34■□□□□ 0.21
CPEB3Q8NE35 AC008556.1-201ENST00000610908 2040 ntBASIC16.34■□□□□ 0.21
CPEB3Q8NE35 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.34■□□□□ 0.21
CPEB3Q8NE35 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPEB3Q8NE35 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.34■□□□□ 0.21
CPEB3Q8NE35 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPEB3Q8NE35 Z98044.1-201ENST00000632503 1764 ntBASIC16.33■□□□□ 0.21
CPEB3Q8NE35 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CPEB3Q8NE35 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPEB3Q8NE35 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CPEB3Q8NE35 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPEB3Q8NE35 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPEB3Q8NE35 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPEB3Q8NE35 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPEB3Q8NE35 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.33■□□□□ 0.2
CPEB3Q8NE35 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CPEB3Q8NE35 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.33■□□□□ 0.2
CPEB3Q8NE35 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.33■□□□□ 0.2
CPEB3Q8NE35 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.33■□□□□ 0.2
CPEB3Q8NE35 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CPEB3Q8NE35 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.33■□□□□ 0.2
CPEB3Q8NE35 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPEB3Q8NE35 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPEB3Q8NE35 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPEB3Q8NE35 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.33■□□□□ 0.2
CPEB3Q8NE35 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPEB3Q8NE35 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
CPEB3Q8NE35 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPEB3Q8NE35 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.33■□□□□ 0.2
CPEB3Q8NE35 AL109659.2-201ENST00000606809 1674 ntBASIC16.33■□□□□ 0.2
CPEB3Q8NE35 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.33■□□□□ 0.2
CPEB3Q8NE35 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.33■□□□□ 0.2
CPEB3Q8NE35 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPEB3Q8NE35 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPEB3Q8NE35 AL020996.1-203ENST00000536896 2307 ntBASIC16.33■□□□□ 0.2
CPEB3Q8NE35 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPEB3Q8NE35 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPEB3Q8NE35 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPEB3Q8NE35 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPEB3Q8NE35 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CPEB3Q8NE35 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPEB3Q8NE35 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPEB3Q8NE35 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPEB3Q8NE35 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPEB3Q8NE35 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPEB3Q8NE35 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
CPEB3Q8NE35 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPEB3Q8NE35 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPEB3Q8NE35 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPEB3Q8NE35 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.32■□□□□ 0.2
CPEB3Q8NE35 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPEB3Q8NE35 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.32■□□□□ 0.2
CPEB3Q8NE35 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPEB3Q8NE35 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CPEB3Q8NE35 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.32■□□□□ 0.2
CPEB3Q8NE35 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPEB3Q8NE35 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.32■□□□□ 0.2
CPEB3Q8NE35 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.32■□□□□ 0.2
CPEB3Q8NE35 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CPEB3Q8NE35 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CPEB3Q8NE35 AL357033.4-201ENST00000617703 1807 ntBASIC16.32■□□□□ 0.2
CPEB3Q8NE35 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.32■□□□□ 0.2
CPEB3Q8NE35 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPEB3Q8NE35 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPEB3Q8NE35 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.31■□□□□ 0.2
CPEB3Q8NE35 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms