Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC89Q8N998 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC89Q8N998 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC89Q8N998 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC89Q8N998 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC89Q8N998 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC89Q8N998 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC89Q8N998 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC89Q8N998 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC89Q8N998 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC89Q8N998 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC89Q8N998 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC89Q8N998 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CCDC89Q8N998 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC89Q8N998 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC89Q8N998 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC89Q8N998 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.4■□□□□ 0.7
CCDC89Q8N998 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC89Q8N998 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC89Q8N998 AC110285.5-201ENST00000611501 352 ntBASIC19.4■□□□□ 0.7
CCDC89Q8N998 AC131212.4-201ENST00000623606 975 ntBASIC19.4■□□□□ 0.7
CCDC89Q8N998 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC89Q8N998 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CCDC89Q8N998 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC89Q8N998 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC89Q8N998 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC89Q8N998 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC89Q8N998 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC89Q8N998 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC89Q8N998 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC89Q8N998 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
CCDC89Q8N998 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CCDC89Q8N998 RCC2P6-201ENST00000526625 1557 ntBASIC19.4■□□□□ 0.7
CCDC89Q8N998 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC89Q8N998 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC89Q8N998 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.39■□□□□ 0.7
CCDC89Q8N998 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC89Q8N998 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC89Q8N998 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CCDC89Q8N998 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC89Q8N998 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.39■□□□□ 0.7
CCDC89Q8N998 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.39■□□□□ 0.7
CCDC89Q8N998 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
CCDC89Q8N998 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC89Q8N998 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC89Q8N998 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC89Q8N998 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CCDC89Q8N998 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC89Q8N998 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC89Q8N998 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC89Q8N998 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC89Q8N998 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC89Q8N998 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC89Q8N998 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC89Q8N998 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC89Q8N998 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC89Q8N998 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC89Q8N998 OR6D1P-202ENST00000641007 5290 ntBASIC19.39■□□□□ 0.69
CCDC89Q8N998 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC89Q8N998 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC89Q8N998 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC89Q8N998 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC89Q8N998 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC89Q8N998 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC89Q8N998 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCDC89Q8N998 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC89Q8N998 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC89Q8N998 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC89Q8N998 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC89Q8N998 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC89Q8N998 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC89Q8N998 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC89Q8N998 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC89Q8N998 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC89Q8N998 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC89Q8N998 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC89Q8N998 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC89Q8N998 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC89Q8N998 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC89Q8N998 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC89Q8N998 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CCDC89Q8N998 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
CCDC89Q8N998 AC133681.1-201ENST00000465482 601 ntBASIC19.38■□□□□ 0.69
CCDC89Q8N998 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CCDC89Q8N998 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC89Q8N998 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CCDC89Q8N998 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC89Q8N998 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC89Q8N998 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC89Q8N998 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC89Q8N998 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC89Q8N998 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC89Q8N998 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC89Q8N998 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC89Q8N998 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CCDC89Q8N998 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC89Q8N998 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CCDC89Q8N998 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC89Q8N998 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC89Q8N998 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms