Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 AC135050.7-201ENST00000624508 2218 ntBASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 AL158047.1-201ENST00000445918 881 ntBASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 MYC-208ENST00000641036 567 ntBASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 PCDHB18P-201ENST00000524813 2368 ntBASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 RCC2P3-201ENST00000418112 1537 ntBASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSMEM1Q8N8F7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 AL109659.2-201ENST00000606809 1674 ntBASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 AL357033.4-201ENST00000617703 1807 ntBASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 BICD1-207ENST00000551848 1962 ntBASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 AC113410.3-201ENST00000623366 203 ntBASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 AL049637.2-201ENST00000641778 930 ntBASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LSMEM1Q8N8F7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 CA15P1-201ENST00000481698 905 ntBASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 KRT8P45-201ENST00000414328 1447 ntBASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 AC112777.1-201ENST00000540175 1423 ntBASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.09■□□□□ 0.33
LSMEM1Q8N8F7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms