Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIX5Q8N196 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.1■□□□□ 0.65
SIX5Q8N196 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SIX5Q8N196 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIX5Q8N196 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.1■□□□□ 0.65
SIX5Q8N196 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SIX5Q8N196 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SIX5Q8N196 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SIX5Q8N196 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SIX5Q8N196 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SIX5Q8N196 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIX5Q8N196 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.09■□□□□ 0.65
SIX5Q8N196 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.09■□□□□ 0.65
SIX5Q8N196 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIX5Q8N196 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.09■□□□□ 0.65
SIX5Q8N196 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIX5Q8N196 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.09■□□□□ 0.65
SIX5Q8N196 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIX5Q8N196 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIX5Q8N196 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIX5Q8N196 SDHAP1-207ENST00000440850 2000 ntBASIC19.09■□□□□ 0.65
SIX5Q8N196 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
SIX5Q8N196 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIX5Q8N196 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
SIX5Q8N196 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.09■□□□□ 0.65
SIX5Q8N196 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.09■□□□□ 0.65
SIX5Q8N196 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.09■□□□□ 0.65
SIX5Q8N196 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SIX5Q8N196 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.09■□□□□ 0.65
SIX5Q8N196 AC010240.3-201ENST00000607688 395 ntBASIC19.09■□□□□ 0.65
SIX5Q8N196 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.09■□□□□ 0.65
SIX5Q8N196 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.09■□□□□ 0.65
SIX5Q8N196 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.09■□□□□ 0.65
SIX5Q8N196 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIX5Q8N196 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SIX5Q8N196 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIX5Q8N196 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SIX5Q8N196 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.09■□□□□ 0.65
SIX5Q8N196 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SIX5Q8N196 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
SIX5Q8N196 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.08■□□□□ 0.65
SIX5Q8N196 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
SIX5Q8N196 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SIX5Q8N196 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.08■□□□□ 0.65
SIX5Q8N196 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SIX5Q8N196 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIX5Q8N196 FAM197Y8-203ENST00000450145 560 ntBASIC19.08■□□□□ 0.64
SIX5Q8N196 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
SIX5Q8N196 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.08■□□□□ 0.64
SIX5Q8N196 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.08■□□□□ 0.64
SIX5Q8N196 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.08■□□□□ 0.64
SIX5Q8N196 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.08■□□□□ 0.64
SIX5Q8N196 AL592071.1-201ENST00000611956 408 ntBASIC19.08■□□□□ 0.64
SIX5Q8N196 AC124864.1-201ENST00000623408 392 ntBASIC19.08■□□□□ 0.64
SIX5Q8N196 NSUN5P1-202ENST00000421140 1535 ntBASIC19.08■□□□□ 0.64
SIX5Q8N196 NSUN5P2-203ENST00000457352 1529 ntBASIC19.08■□□□□ 0.64
SIX5Q8N196 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.08■□□□□ 0.64
SIX5Q8N196 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIX5Q8N196 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SIX5Q8N196 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SIX5Q8N196 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIX5Q8N196 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIX5Q8N196 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIX5Q8N196 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SIX5Q8N196 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SIX5Q8N196 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIX5Q8N196 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIX5Q8N196 KRT8P3-201ENST00000519669 1449 ntBASIC19.08■□□□□ 0.64
SIX5Q8N196 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
SIX5Q8N196 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX5Q8N196 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.07■□□□□ 0.64
SIX5Q8N196 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.07■□□□□ 0.64
SIX5Q8N196 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX5Q8N196 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.07■□□□□ 0.64
SIX5Q8N196 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIX5Q8N196 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.07■□□□□ 0.64
SIX5Q8N196 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SIX5Q8N196 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIX5Q8N196 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.07■□□□□ 0.64
SIX5Q8N196 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIX5Q8N196 POLD2P1-201ENST00000511220 997 ntBASIC19.07■□□□□ 0.64
SIX5Q8N196 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.07■□□□□ 0.64
SIX5Q8N196 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.07■□□□□ 0.64
SIX5Q8N196 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX5Q8N196 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.07■□□□□ 0.64
SIX5Q8N196 GPR32P1-201ENST00000601788 811 ntBASIC19.07■□□□□ 0.64
SIX5Q8N196 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.07■□□□□ 0.64
SIX5Q8N196 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SIX5Q8N196 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX5Q8N196 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.07■□□□□ 0.64
SIX5Q8N196 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIX5Q8N196 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.07■□□□□ 0.64
SIX5Q8N196 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX5Q8N196 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.07■□□□□ 0.64
SIX5Q8N196 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX5Q8N196 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIX5Q8N196 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIX5Q8N196 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX5Q8N196 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX5Q8N196 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms