Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SMC5Q8IY18 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC23.14■■□□□ 1.29
SMC5Q8IY18 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SMC5Q8IY18 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC23.14■■□□□ 1.29
SMC5Q8IY18 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC23.14■■□□□ 1.29
SMC5Q8IY18 AP005242.2-201ENST00000580065 1175 ntBASIC23.14■■□□□ 1.29
SMC5Q8IY18 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC23.14■■□□□ 1.29
SMC5Q8IY18 AC026471.5-201ENST00000615068 467 ntBASIC23.14■■□□□ 1.29
SMC5Q8IY18 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC23.14■■□□□ 1.29
SMC5Q8IY18 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SMC5Q8IY18 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SMC5Q8IY18 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SMC5Q8IY18 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SMC5Q8IY18 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SMC5Q8IY18 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SMC5Q8IY18 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMC5Q8IY18 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMC5Q8IY18 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMC5Q8IY18 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SMC5Q8IY18 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMC5Q8IY18 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC23.13■■□□□ 1.29
SMC5Q8IY18 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC23.13■■□□□ 1.29
SMC5Q8IY18 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMC5Q8IY18 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SMC5Q8IY18 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
SMC5Q8IY18 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.13■■□□□ 1.29
SMC5Q8IY18 MCCD1P1-208ENST00000445732 328 ntBASIC23.13■■□□□ 1.29
SMC5Q8IY18 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.13■■□□□ 1.29
SMC5Q8IY18 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC23.13■■□□□ 1.29
SMC5Q8IY18 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SMC5Q8IY18 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC23.13■■□□□ 1.29
SMC5Q8IY18 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC23.13■■□□□ 1.29
SMC5Q8IY18 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMC5Q8IY18 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC23.13■■□□□ 1.29
SMC5Q8IY18 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMC5Q8IY18 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMC5Q8IY18 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
SMC5Q8IY18 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMC5Q8IY18 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC23.13■■□□□ 1.29
SMC5Q8IY18 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMC5Q8IY18 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SMC5Q8IY18 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC23.13■■□□□ 1.29
SMC5Q8IY18 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC23.12■■□□□ 1.29
SMC5Q8IY18 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SMC5Q8IY18 CD276-201ENST00000318424 2738 ntTSL 5 BASIC23.12■■□□□ 1.29
SMC5Q8IY18 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC23.12■■□□□ 1.29
SMC5Q8IY18 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SMC5Q8IY18 AL133373.2-201ENST00000623187 2828 ntBASIC23.12■■□□□ 1.29
SMC5Q8IY18 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMC5Q8IY18 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMC5Q8IY18 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMC5Q8IY18 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SMC5Q8IY18 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC23.12■■□□□ 1.29
SMC5Q8IY18 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC23.12■■□□□ 1.29
SMC5Q8IY18 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC23.12■■□□□ 1.29
SMC5Q8IY18 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC23.12■■□□□ 1.29
SMC5Q8IY18 AL023803.3-201ENST00000615559 522 ntBASIC23.12■■□□□ 1.29
SMC5Q8IY18 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
SMC5Q8IY18 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMC5Q8IY18 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMC5Q8IY18 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC23.12■■□□□ 1.29
SMC5Q8IY18 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC23.12■■□□□ 1.29
SMC5Q8IY18 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC23.12■■□□□ 1.29
SMC5Q8IY18 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SMC5Q8IY18 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMC5Q8IY18 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SMC5Q8IY18 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMC5Q8IY18 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMC5Q8IY18 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMC5Q8IY18 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SMC5Q8IY18 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC23.11■■□□□ 1.29
SMC5Q8IY18 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SMC5Q8IY18 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
SMC5Q8IY18 ESPNP-201ENST00000270691 2015 ntBASIC23.11■■□□□ 1.29
SMC5Q8IY18 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SMC5Q8IY18 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC23.11■■□□□ 1.29
SMC5Q8IY18 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SMC5Q8IY18 KRT8P50-201ENST00000562022 1438 ntBASIC23.11■■□□□ 1.29
SMC5Q8IY18 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.11■■□□□ 1.29
SMC5Q8IY18 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
SMC5Q8IY18 CRYGFP-201ENST00000418459 633 ntBASIC23.11■■□□□ 1.29
SMC5Q8IY18 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SMC5Q8IY18 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC23.11■■□□□ 1.29
SMC5Q8IY18 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC23.11■■□□□ 1.29
SMC5Q8IY18 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC23.11■■□□□ 1.29
SMC5Q8IY18 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SMC5Q8IY18 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC23.11■■□□□ 1.29
SMC5Q8IY18 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC23.11■■□□□ 1.29
SMC5Q8IY18 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SMC5Q8IY18 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC23.11■■□□□ 1.29
SMC5Q8IY18 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SMC5Q8IY18 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
SMC5Q8IY18 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC23.11■■□□□ 1.29
SMC5Q8IY18 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
SMC5Q8IY18 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SMC5Q8IY18 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMC5Q8IY18 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC23.1■■□□□ 1.29
SMC5Q8IY18 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC23.1■■□□□ 1.29
SMC5Q8IY18 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMC5Q8IY18 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms