Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 AC073508.3-201ENST00000619697 1419 ntBASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 ATP5G1P1-201ENST00000448724 379 ntBASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 AL512604.3-201ENST00000569583 964 ntBASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 AL590326.2-201ENST00000625139 305 ntBASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 AC009947.2-201ENST00000444014 672 ntBASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 AC141257.4-201ENST00000634557 245 ntBASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 AC136944.6-201ENST00000634818 245 ntBASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCUBE3Q8IX30 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.6■□□□□ 0.73
SCUBE3Q8IX30 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SCUBE3Q8IX30 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SCUBE3Q8IX30 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCUBE3Q8IX30 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCUBE3Q8IX30 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCUBE3Q8IX30 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.59■□□□□ 0.73
SCUBE3Q8IX30 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SCUBE3Q8IX30 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms