Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL3Q8IVW4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL3Q8IVW4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
CDKL3Q8IVW4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL3Q8IVW4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL3Q8IVW4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL3Q8IVW4 BICD1-207ENST00000551848 1962 ntBASIC19.21■□□□□ 0.67
CDKL3Q8IVW4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL3Q8IVW4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CDKL3Q8IVW4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 AL049637.2-201ENST00000641778 930 ntBASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 AL109659.2-201ENST00000606809 1674 ntBASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL3Q8IVW4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL3Q8IVW4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.19■□□□□ 0.66
CDKL3Q8IVW4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL3Q8IVW4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CDKL3Q8IVW4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL3Q8IVW4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL3Q8IVW4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL3Q8IVW4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.19■□□□□ 0.66
CDKL3Q8IVW4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.19■□□□□ 0.66
CDKL3Q8IVW4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CDKL3Q8IVW4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.19■□□□□ 0.66
CDKL3Q8IVW4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL3Q8IVW4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.19■□□□□ 0.66
CDKL3Q8IVW4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.19■□□□□ 0.66
CDKL3Q8IVW4 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.19■□□□□ 0.66
CDKL3Q8IVW4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.19■□□□□ 0.66
CDKL3Q8IVW4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL3Q8IVW4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL3Q8IVW4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL3Q8IVW4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL3Q8IVW4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.19■□□□□ 0.66
CDKL3Q8IVW4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL3Q8IVW4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CDKL3Q8IVW4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL3Q8IVW4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.19■□□□□ 0.66
CDKL3Q8IVW4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
CDKL3Q8IVW4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 AL390961.4-201ENST00000623958 2535 ntBASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 AL355355.2-201ENST00000442321 338 ntBASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 AC097488.1-201ENST00000507834 756 ntBASIC19.18■□□□□ 0.66
CDKL3Q8IVW4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms