Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
TRIM50Q86XT4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
TRIM50Q86XT4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM50Q86XT4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.93
TRIM50Q86XT4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM50Q86XT4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
TRIM50Q86XT4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM50Q86XT4 HLA-F-220ENST00000434407 884 ntBASIC20.83■□□□□ 0.93
TRIM50Q86XT4 AC092119.3-201ENST00000612618 583 ntBASIC20.83■□□□□ 0.93
TRIM50Q86XT4 NPAP1P7-201ENST00000613027 823 ntBASIC20.83■□□□□ 0.93
TRIM50Q86XT4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
TRIM50Q86XT4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM50Q86XT4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.92
TRIM50Q86XT4 AL391807.1-203ENST00000604392 2365 ntBASIC20.82■□□□□ 0.92
TRIM50Q86XT4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM50Q86XT4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TRIM50Q86XT4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM50Q86XT4 AL162741.1-201ENST00000565563 1558 ntBASIC20.82■□□□□ 0.92
TRIM50Q86XT4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM50Q86XT4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.82■□□□□ 0.92
TRIM50Q86XT4 ATP5G2P1-201ENST00000433580 426 ntBASIC20.82■□□□□ 0.92
TRIM50Q86XT4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.82■□□□□ 0.92
TRIM50Q86XT4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.82■□□□□ 0.92
TRIM50Q86XT4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.82■□□□□ 0.92
TRIM50Q86XT4 KRT126P-201ENST00000549467 1181 ntBASIC20.82■□□□□ 0.92
TRIM50Q86XT4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.82■□□□□ 0.92
TRIM50Q86XT4 AC011498.5-201ENST00000592027 486 ntBASIC20.82■□□□□ 0.92
TRIM50Q86XT4 AC010240.3-201ENST00000607688 395 ntBASIC20.82■□□□□ 0.92
TRIM50Q86XT4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.82■□□□□ 0.92
TRIM50Q86XT4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM50Q86XT4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TRIM50Q86XT4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM50Q86XT4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM50Q86XT4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TRIM50Q86XT4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM50Q86XT4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
TRIM50Q86XT4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM50Q86XT4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TRIM50Q86XT4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM50Q86XT4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM50Q86XT4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM50Q86XT4 HOXB1-202ENST00000577092 1414 ntBASIC20.81■□□□□ 0.92
TRIM50Q86XT4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM50Q86XT4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM50Q86XT4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.81■□□□□ 0.92
TRIM50Q86XT4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.81■□□□□ 0.92
TRIM50Q86XT4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM50Q86XT4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.81■□□□□ 0.92
TRIM50Q86XT4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.81■□□□□ 0.92
TRIM50Q86XT4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM50Q86XT4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.81■□□□□ 0.92
TRIM50Q86XT4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM50Q86XT4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.81■□□□□ 0.92
TRIM50Q86XT4 AL049812.1-201ENST00000432563 2267 ntBASIC20.81■□□□□ 0.92
TRIM50Q86XT4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.81■□□□□ 0.92
TRIM50Q86XT4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM50Q86XT4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TRIM50Q86XT4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
TRIM50Q86XT4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM50Q86XT4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM50Q86XT4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TRIM50Q86XT4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM50Q86XT4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM50Q86XT4 AC006333.2-201ENST00000607957 2099 ntBASIC20.81■□□□□ 0.92
TRIM50Q86XT4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.8■□□□□ 0.92
TRIM50Q86XT4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM50Q86XT4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM50Q86XT4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM50Q86XT4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM50Q86XT4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM50Q86XT4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.8■□□□□ 0.92
TRIM50Q86XT4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TRIM50Q86XT4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TRIM50Q86XT4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.8■□□□□ 0.92
TRIM50Q86XT4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM50Q86XT4 AC104390.1-201ENST00000555663 520 ntBASIC20.8■□□□□ 0.92
TRIM50Q86XT4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.8■□□□□ 0.92
TRIM50Q86XT4 AC068587.9-201ENST00000641814 219 ntBASIC20.8■□□□□ 0.92
TRIM50Q86XT4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
TRIM50Q86XT4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TRIM50Q86XT4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.8■□□□□ 0.92
TRIM50Q86XT4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM50Q86XT4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM50Q86XT4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM50Q86XT4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM50Q86XT4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM50Q86XT4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM50Q86XT4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM50Q86XT4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
TRIM50Q86XT4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM50Q86XT4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM50Q86XT4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM50Q86XT4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.79■□□□□ 0.92
TRIM50Q86XT4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.79■□□□□ 0.92
TRIM50Q86XT4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.79■□□□□ 0.92
TRIM50Q86XT4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM50Q86XT4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.79■□□□□ 0.92
TRIM50Q86XT4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.79■□□□□ 0.92
TRIM50Q86XT4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM50Q86XT4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms