Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF546Q86UE3 AC123595.1-201ENST00000440769 1046 ntBASIC15.55■□□□□ 0.08
ZNF546Q86UE3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC15.55■□□□□ 0.08
ZNF546Q86UE3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF546Q86UE3 RALB-208ENST00000631312 311 ntTSL 5 BASIC15.55■□□□□ 0.08
ZNF546Q86UE3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.55■□□□□ 0.08
ZNF546Q86UE3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF546Q86UE3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF546Q86UE3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF546Q86UE3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF546Q86UE3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.55■□□□□ 0.08
ZNF546Q86UE3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF546Q86UE3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF546Q86UE3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF546Q86UE3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
ZNF546Q86UE3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.55■□□□□ 0.08
ZNF546Q86UE3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF546Q86UE3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 AC046158.3-201ENST00000624947 2558 ntBASIC15.54■□□□□ 0.08
ZNF546Q86UE3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
ZNF546Q86UE3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 AC018553.1-201ENST00000616682 1458 ntBASIC15.53■□□□□ 0.08
ZNF546Q86UE3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 AC104417.2-201ENST00000562989 1793 ntBASIC15.53■□□□□ 0.08
ZNF546Q86UE3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 NKILA-202ENST00000614771 2598 ntBASIC15.53■□□□□ 0.08
ZNF546Q86UE3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF546Q86UE3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF546Q86UE3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms