Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL55Q7Z7F7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 GAS2L1P1-201ENST00000420145 1480 ntBASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 TSPY23P-201ENST00000440136 739 ntBASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 KRT18P6-201ENST00000555540 1265 ntBASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
MRPL55Q7Z7F7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
MRPL55Q7Z7F7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
MRPL55Q7Z7F7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC12.02□□□□□ -0.48
MRPL55Q7Z7F7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
MRPL55Q7Z7F7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
MRPL55Q7Z7F7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC12.02□□□□□ -0.48
MRPL55Q7Z7F7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
MRPL55Q7Z7F7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC12.02□□□□□ -0.48
MRPL55Q7Z7F7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC12.02□□□□□ -0.48
MRPL55Q7Z7F7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
MRPL55Q7Z7F7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 WIZP1-201ENST00000531444 2299 ntBASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 ESRRAP1-201ENST00000400596 1257 ntBASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL55Q7Z7F7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms