Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSMD2Q7Z408 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CSMD2Q7Z408 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CSMD2Q7Z408 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSMD2Q7Z408 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
CSMD2Q7Z408 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.73■□□□□ 0.11
CSMD2Q7Z408 AC244107.1-201ENST00000442033 332 ntBASIC15.73■□□□□ 0.11
CSMD2Q7Z408 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.73■□□□□ 0.11
CSMD2Q7Z408 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSMD2Q7Z408 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.73■□□□□ 0.11
CSMD2Q7Z408 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.73■□□□□ 0.11
CSMD2Q7Z408 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
CSMD2Q7Z408 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.73■□□□□ 0.11
CSMD2Q7Z408 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CSMD2Q7Z408 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSMD2Q7Z408 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD2Q7Z408 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.72■□□□□ 0.11
CSMD2Q7Z408 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD2Q7Z408 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.72■□□□□ 0.11
CSMD2Q7Z408 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD2Q7Z408 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.72■□□□□ 0.11
CSMD2Q7Z408 DNAJB3-201ENST00000446806 729 ntBASIC15.72■□□□□ 0.11
CSMD2Q7Z408 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.72■□□□□ 0.11
CSMD2Q7Z408 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.72■□□□□ 0.11
CSMD2Q7Z408 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.72■□□□□ 0.11
CSMD2Q7Z408 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD2Q7Z408 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
CSMD2Q7Z408 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.72■□□□□ 0.11
CSMD2Q7Z408 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD2Q7Z408 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD2Q7Z408 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD2Q7Z408 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.72■□□□□ 0.11
CSMD2Q7Z408 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.72■□□□□ 0.11
CSMD2Q7Z408 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD2Q7Z408 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.72■□□□□ 0.11
CSMD2Q7Z408 AC004832.2-201ENST00000426397 482 ntBASIC15.71■□□□□ 0.11
CSMD2Q7Z408 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.71■□□□□ 0.11
CSMD2Q7Z408 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.71■□□□□ 0.11
CSMD2Q7Z408 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
CSMD2Q7Z408 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD2Q7Z408 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.71■□□□□ 0.11
CSMD2Q7Z408 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.71■□□□□ 0.11
CSMD2Q7Z408 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.71■□□□□ 0.11
CSMD2Q7Z408 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CSMD2Q7Z408 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
CSMD2Q7Z408 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD2Q7Z408 RPS2P28-201ENST00000314255 741 ntBASIC15.71■□□□□ 0.11
CSMD2Q7Z408 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD2Q7Z408 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD2Q7Z408 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD2Q7Z408 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD2Q7Z408 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.71■□□□□ 0.11
CSMD2Q7Z408 AC083906.6-201ENST00000641366 219 ntBASIC15.71■□□□□ 0.11
CSMD2Q7Z408 AC079781.4-201ENST00000641908 219 ntBASIC15.71■□□□□ 0.11
CSMD2Q7Z408 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
CSMD2Q7Z408 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD2Q7Z408 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC15.71■□□□□ 0.11
CSMD2Q7Z408 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD2Q7Z408 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.71■□□□□ 0.11
CSMD2Q7Z408 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD2Q7Z408 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD2Q7Z408 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD2Q7Z408 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD2Q7Z408 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.71■□□□□ 0.11
CSMD2Q7Z408 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CSMD2Q7Z408 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD2Q7Z408 AC005336.2-201ENST00000593183 939 ntBASIC15.71■□□□□ 0.11
CSMD2Q7Z408 AC025062.2-201ENST00000605477 670 ntBASIC15.71■□□□□ 0.11
CSMD2Q7Z408 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.71■□□□□ 0.1
CSMD2Q7Z408 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.71■□□□□ 0.1
CSMD2Q7Z408 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CSMD2Q7Z408 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CSMD2Q7Z408 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.7■□□□□ 0.1
CSMD2Q7Z408 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.7■□□□□ 0.1
CSMD2Q7Z408 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.7■□□□□ 0.1
CSMD2Q7Z408 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD2Q7Z408 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD2Q7Z408 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.7■□□□□ 0.1
CSMD2Q7Z408 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD2Q7Z408 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD2Q7Z408 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CSMD2Q7Z408 AL109659.2-201ENST00000606809 1674 ntBASIC15.7■□□□□ 0.1
CSMD2Q7Z408 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.7■□□□□ 0.1
CSMD2Q7Z408 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD2Q7Z408 YBX1P5-201ENST00000509441 847 ntBASIC15.7■□□□□ 0.1
CSMD2Q7Z408 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.7■□□□□ 0.1
CSMD2Q7Z408 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.7■□□□□ 0.1
CSMD2Q7Z408 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CSMD2Q7Z408 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD2Q7Z408 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD2Q7Z408 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.7■□□□□ 0.1
CSMD2Q7Z408 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD2Q7Z408 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.7■□□□□ 0.1
CSMD2Q7Z408 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.7■□□□□ 0.1
CSMD2Q7Z408 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CSMD2Q7Z408 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.7■□□□□ 0.1
CSMD2Q7Z408 AC009533.2-201ENST00000543664 586 ntBASIC15.7■□□□□ 0.1
CSMD2Q7Z408 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.7■□□□□ 0.1
CSMD2Q7Z408 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD2Q7Z408 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms