Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAPH1Q70E73 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.79■□□□□ 0.6
RAPH1Q70E73 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAPH1Q70E73 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAPH1Q70E73 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAPH1Q70E73 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAPH1Q70E73 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAPH1Q70E73 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.79■□□□□ 0.6
RAPH1Q70E73 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAPH1Q70E73 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.79■□□□□ 0.6
RAPH1Q70E73 KRT8P41-201ENST00000533985 1514 ntBASIC18.79■□□□□ 0.6
RAPH1Q70E73 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAPH1Q70E73 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.79■□□□□ 0.6
RAPH1Q70E73 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RAPH1Q70E73 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
RAPH1Q70E73 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAPH1Q70E73 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAPH1Q70E73 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.78■□□□□ 0.6
RAPH1Q70E73 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.78■□□□□ 0.6
RAPH1Q70E73 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAPH1Q70E73 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RAPH1Q70E73 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAPH1Q70E73 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RAPH1Q70E73 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAPH1Q70E73 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAPH1Q70E73 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAPH1Q70E73 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAPH1Q70E73 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.78■□□□□ 0.6
RAPH1Q70E73 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAPH1Q70E73 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.78■□□□□ 0.6
RAPH1Q70E73 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.78■□□□□ 0.6
RAPH1Q70E73 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAPH1Q70E73 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAPH1Q70E73 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAPH1Q70E73 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.78■□□□□ 0.6
RAPH1Q70E73 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAPH1Q70E73 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RAPH1Q70E73 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAPH1Q70E73 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAPH1Q70E73 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.77■□□□□ 0.6
RAPH1Q70E73 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RAPH1Q70E73 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.77■□□□□ 0.6
RAPH1Q70E73 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.77■□□□□ 0.6
RAPH1Q70E73 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.77■□□□□ 0.6
RAPH1Q70E73 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAPH1Q70E73 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAPH1Q70E73 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAPH1Q70E73 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAPH1Q70E73 KRT16P5-201ENST00000455284 522 ntBASIC18.77■□□□□ 0.6
RAPH1Q70E73 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.77■□□□□ 0.6
RAPH1Q70E73 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.77■□□□□ 0.6
RAPH1Q70E73 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAPH1Q70E73 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAPH1Q70E73 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.77■□□□□ 0.6
RAPH1Q70E73 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.77■□□□□ 0.6
RAPH1Q70E73 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.77■□□□□ 0.6
RAPH1Q70E73 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAPH1Q70E73 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAPH1Q70E73 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAPH1Q70E73 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
RAPH1Q70E73 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.77■□□□□ 0.59
RAPH1Q70E73 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
RAPH1Q70E73 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
RAPH1Q70E73 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAPH1Q70E73 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAPH1Q70E73 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.76■□□□□ 0.59
RAPH1Q70E73 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAPH1Q70E73 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.76■□□□□ 0.59
RAPH1Q70E73 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RAPH1Q70E73 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAPH1Q70E73 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAPH1Q70E73 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.76■□□□□ 0.59
RAPH1Q70E73 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAPH1Q70E73 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAPH1Q70E73 ID1-201ENST00000376105 1233 ntBASIC18.76■□□□□ 0.59
RAPH1Q70E73 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RAPH1Q70E73 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAPH1Q70E73 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAPH1Q70E73 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.76■□□□□ 0.59
RAPH1Q70E73 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.76■□□□□ 0.59
RAPH1Q70E73 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
RAPH1Q70E73 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
RAPH1Q70E73 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.76■□□□□ 0.59
RAPH1Q70E73 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.76■□□□□ 0.59
RAPH1Q70E73 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RAPH1Q70E73 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.76■□□□□ 0.59
RAPH1Q70E73 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RAPH1Q70E73 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAPH1Q70E73 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAPH1Q70E73 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAPH1Q70E73 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAPH1Q70E73 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAPH1Q70E73 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.76■□□□□ 0.59
RAPH1Q70E73 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAPH1Q70E73 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAPH1Q70E73 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAPH1Q70E73 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAPH1Q70E73 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAPH1Q70E73 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAPH1Q70E73 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms