Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC27A1Q6PCB7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SLC27A1Q6PCB7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC27A1Q6PCB7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.2■□□□□ 0.82
SLC27A1Q6PCB7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 KRT18P41-201ENST00000518924 1277 ntBASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 KRT8P50-201ENST00000562022 1438 ntBASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC27A1Q6PCB7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 PVRIG2P-201ENST00000435460 978 ntBASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 AC009065.1-201ENST00000564055 1225 ntBASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 SLC25A24-204ENST00000569674 2357 ntBASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.18■□□□□ 0.82
SLC27A1Q6PCB7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC27A1Q6PCB7 AL162741.1-201ENST00000565563 1558 ntBASIC20.17■□□□□ 0.82
SLC27A1Q6PCB7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC27A1Q6PCB7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC27A1Q6PCB7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.17■□□□□ 0.82
SLC27A1Q6PCB7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC27A1Q6PCB7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC27A1Q6PCB7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC27A1Q6PCB7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC27A1Q6PCB7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC27A1Q6PCB7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.17■□□□□ 0.82
SLC27A1Q6PCB7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC27A1Q6PCB7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC27A1Q6PCB7 MIR662-201ENST00000384847 95 ntBASIC20.17■□□□□ 0.82
SLC27A1Q6PCB7 AP000593.1-201ENST00000393668 712 ntBASIC20.17■□□□□ 0.82
SLC27A1Q6PCB7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
SLC27A1Q6PCB7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.17■□□□□ 0.82
SLC27A1Q6PCB7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
SLC27A1Q6PCB7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC27A1Q6PCB7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC27A1Q6PCB7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC27A1Q6PCB7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC27A1Q6PCB7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.17■□□□□ 0.82
SLC27A1Q6PCB7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC27A1Q6PCB7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC27A1Q6PCB7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms