Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CCDC62Q6P9F0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC62Q6P9F0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC62Q6P9F0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CCDC62Q6P9F0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC62Q6P9F0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC62Q6P9F0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC62Q6P9F0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
CCDC62Q6P9F0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC62Q6P9F0 AC092329.2-201ENST00000598402 547 ntBASIC20.99■□□□□ 0.95
CCDC62Q6P9F0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC62Q6P9F0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC62Q6P9F0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CCDC62Q6P9F0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC62Q6P9F0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC62Q6P9F0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC62Q6P9F0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CCDC62Q6P9F0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
CCDC62Q6P9F0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CCDC62Q6P9F0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC62Q6P9F0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC62Q6P9F0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC62Q6P9F0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC62Q6P9F0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC62Q6P9F0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC62Q6P9F0 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC62Q6P9F0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC62Q6P9F0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC62Q6P9F0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.98■□□□□ 0.95
CCDC62Q6P9F0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC62Q6P9F0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC62Q6P9F0 RNF126P1-202ENST00000569893 925 ntBASIC20.98■□□□□ 0.95
CCDC62Q6P9F0 AC068587.9-201ENST00000641814 219 ntBASIC20.98■□□□□ 0.95
CCDC62Q6P9F0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC62Q6P9F0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC62Q6P9F0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC62Q6P9F0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC62Q6P9F0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC62Q6P9F0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC62Q6P9F0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC62Q6P9F0 AC006333.2-201ENST00000607957 2099 ntBASIC20.98■□□□□ 0.95
CCDC62Q6P9F0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC62Q6P9F0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC62Q6P9F0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC62Q6P9F0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC62Q6P9F0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC62Q6P9F0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC62Q6P9F0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC62Q6P9F0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CCDC62Q6P9F0 AC034236.2-201ENST00000606662 1610 ntBASIC20.97■□□□□ 0.95
CCDC62Q6P9F0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC62Q6P9F0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC62Q6P9F0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CCDC62Q6P9F0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
CCDC62Q6P9F0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC62Q6P9F0 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC62Q6P9F0 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC62Q6P9F0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC62Q6P9F0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
CCDC62Q6P9F0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC62Q6P9F0 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC62Q6P9F0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
CCDC62Q6P9F0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC62Q6P9F0 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC62Q6P9F0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
CCDC62Q6P9F0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC62Q6P9F0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC62Q6P9F0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC62Q6P9F0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC62Q6P9F0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC62Q6P9F0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC62Q6P9F0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC62Q6P9F0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC62Q6P9F0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC62Q6P9F0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC62Q6P9F0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CCDC62Q6P9F0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC62Q6P9F0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC62Q6P9F0 RNF165-205ENST00000588679 2904 ntBASIC20.96■□□□□ 0.95
CCDC62Q6P9F0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC62Q6P9F0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC62Q6P9F0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC62Q6P9F0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC62Q6P9F0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC62Q6P9F0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC62Q6P9F0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC62Q6P9F0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC62Q6P9F0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC62Q6P9F0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC62Q6P9F0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC62Q6P9F0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC62Q6P9F0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC62Q6P9F0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC62Q6P9F0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC62Q6P9F0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CCDC62Q6P9F0 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC62Q6P9F0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CCDC62Q6P9F0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC62Q6P9F0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC62Q6P9F0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms