Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM53Q6P2H8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 AL354751.1-201ENST00000412768 1863 ntBASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM53Q6P2H8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM53Q6P2H8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM53Q6P2H8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.09■□□□□ 0.33
TMEM53Q6P2H8 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM53Q6P2H8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM53Q6P2H8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM53Q6P2H8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM53Q6P2H8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.09■□□□□ 0.33
TMEM53Q6P2H8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
TMEM53Q6P2H8 C1QBPP2-201ENST00000528754 825 ntBASIC17.09■□□□□ 0.33
TMEM53Q6P2H8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM53Q6P2H8 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.09■□□□□ 0.33
TMEM53Q6P2H8 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.09■□□□□ 0.33
TMEM53Q6P2H8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM53Q6P2H8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM53Q6P2H8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM53Q6P2H8 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.09■□□□□ 0.33
TMEM53Q6P2H8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TMEM53Q6P2H8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM53Q6P2H8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM53Q6P2H8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM53Q6P2H8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
TMEM53Q6P2H8 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM53Q6P2H8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM53Q6P2H8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM53Q6P2H8 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM53Q6P2H8 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TMEM53Q6P2H8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
TMEM53Q6P2H8 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TMEM53Q6P2H8 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.08■□□□□ 0.33
TMEM53Q6P2H8 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TMEM53Q6P2H8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TMEM53Q6P2H8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TMEM53Q6P2H8 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.08■□□□□ 0.33
TMEM53Q6P2H8 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms