Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SWSAP1Q6NVH7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SWSAP1Q6NVH7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
SWSAP1Q6NVH7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.81■□□□□ 0.92
SWSAP1Q6NVH7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SWSAP1Q6NVH7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SWSAP1Q6NVH7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.8■□□□□ 0.92
SWSAP1Q6NVH7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SWSAP1Q6NVH7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SWSAP1Q6NVH7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.8■□□□□ 0.92
SWSAP1Q6NVH7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SWSAP1Q6NVH7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SWSAP1Q6NVH7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SWSAP1Q6NVH7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
SWSAP1Q6NVH7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SWSAP1Q6NVH7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.8■□□□□ 0.92
SWSAP1Q6NVH7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SWSAP1Q6NVH7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SWSAP1Q6NVH7 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.8■□□□□ 0.92
SWSAP1Q6NVH7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SWSAP1Q6NVH7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.8■□□□□ 0.92
SWSAP1Q6NVH7 AC010240.3-201ENST00000607688 395 ntBASIC20.8■□□□□ 0.92
SWSAP1Q6NVH7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SWSAP1Q6NVH7 AC116407.4-201ENST00000623319 1061 ntBASIC20.8■□□□□ 0.92
SWSAP1Q6NVH7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.8■□□□□ 0.92
SWSAP1Q6NVH7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.8■□□□□ 0.92
SWSAP1Q6NVH7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SWSAP1Q6NVH7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SWSAP1Q6NVH7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SWSAP1Q6NVH7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SWSAP1Q6NVH7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SWSAP1Q6NVH7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SWSAP1Q6NVH7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SWSAP1Q6NVH7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SWSAP1Q6NVH7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
SWSAP1Q6NVH7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SWSAP1Q6NVH7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.79■□□□□ 0.92
SWSAP1Q6NVH7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SWSAP1Q6NVH7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.79■□□□□ 0.92
SWSAP1Q6NVH7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SWSAP1Q6NVH7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SWSAP1Q6NVH7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SWSAP1Q6NVH7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SWSAP1Q6NVH7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SWSAP1Q6NVH7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SWSAP1Q6NVH7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.79■□□□□ 0.92
SWSAP1Q6NVH7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.79■□□□□ 0.92
SWSAP1Q6NVH7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.79■□□□□ 0.92
SWSAP1Q6NVH7 AC083906.6-201ENST00000641366 219 ntBASIC20.79■□□□□ 0.92
SWSAP1Q6NVH7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SWSAP1Q6NVH7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
SWSAP1Q6NVH7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SWSAP1Q6NVH7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SWSAP1Q6NVH7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SWSAP1Q6NVH7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.79■□□□□ 0.92
SWSAP1Q6NVH7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SWSAP1Q6NVH7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SWSAP1Q6NVH7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.78■□□□□ 0.92
SWSAP1Q6NVH7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.78■□□□□ 0.92
SWSAP1Q6NVH7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SWSAP1Q6NVH7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SWSAP1Q6NVH7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SWSAP1Q6NVH7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SWSAP1Q6NVH7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SWSAP1Q6NVH7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SWSAP1Q6NVH7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.78■□□□□ 0.92
SWSAP1Q6NVH7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.78■□□□□ 0.92
SWSAP1Q6NVH7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.78■□□□□ 0.92
SWSAP1Q6NVH7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SWSAP1Q6NVH7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
SWSAP1Q6NVH7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.78■□□□□ 0.92
SWSAP1Q6NVH7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.78■□□□□ 0.92
SWSAP1Q6NVH7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SWSAP1Q6NVH7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SWSAP1Q6NVH7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SWSAP1Q6NVH7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SWSAP1Q6NVH7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SWSAP1Q6NVH7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SWSAP1Q6NVH7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SWSAP1Q6NVH7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SWSAP1Q6NVH7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SWSAP1Q6NVH7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SWSAP1Q6NVH7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.77■□□□□ 0.92
SWSAP1Q6NVH7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.77■□□□□ 0.92
SWSAP1Q6NVH7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SWSAP1Q6NVH7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SWSAP1Q6NVH7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SWSAP1Q6NVH7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SWSAP1Q6NVH7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.77■□□□□ 0.92
SWSAP1Q6NVH7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SWSAP1Q6NVH7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.77■□□□□ 0.92
SWSAP1Q6NVH7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SWSAP1Q6NVH7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SWSAP1Q6NVH7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SWSAP1Q6NVH7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.77■□□□□ 0.92
SWSAP1Q6NVH7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SWSAP1Q6NVH7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SWSAP1Q6NVH7 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.77■□□□□ 0.92
SWSAP1Q6NVH7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SWSAP1Q6NVH7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms