Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TRNP1Q6NT89 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRNP1Q6NT89 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TRNP1Q6NT89 AC073592.3-201ENST00000625118 1834 ntBASIC19.44■□□□□ 0.7
TRNP1Q6NT89 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.44■□□□□ 0.7
TRNP1Q6NT89 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRNP1Q6NT89 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRNP1Q6NT89 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
TRNP1Q6NT89 AC090164.3-201ENST00000610780 2143 ntBASIC19.43■□□□□ 0.7
TRNP1Q6NT89 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRNP1Q6NT89 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRNP1Q6NT89 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.43■□□□□ 0.7
TRNP1Q6NT89 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRNP1Q6NT89 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRNP1Q6NT89 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.43■□□□□ 0.7
TRNP1Q6NT89 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
TRNP1Q6NT89 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRNP1Q6NT89 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.43■□□□□ 0.7
TRNP1Q6NT89 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRNP1Q6NT89 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRNP1Q6NT89 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRNP1Q6NT89 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.43■□□□□ 0.7
TRNP1Q6NT89 AC009947.2-201ENST00000444014 672 ntBASIC19.43■□□□□ 0.7
TRNP1Q6NT89 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.43■□□□□ 0.7
TRNP1Q6NT89 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TRNP1Q6NT89 AL138966.2-201ENST00000621997 464 ntBASIC19.43■□□□□ 0.7
TRNP1Q6NT89 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRNP1Q6NT89 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRNP1Q6NT89 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRNP1Q6NT89 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.43■□□□□ 0.7
TRNP1Q6NT89 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRNP1Q6NT89 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRNP1Q6NT89 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
TRNP1Q6NT89 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRNP1Q6NT89 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRNP1Q6NT89 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRNP1Q6NT89 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRNP1Q6NT89 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.42■□□□□ 0.7
TRNP1Q6NT89 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRNP1Q6NT89 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.42■□□□□ 0.7
TRNP1Q6NT89 MYLKP1-201ENST00000509077 1580 ntBASIC19.42■□□□□ 0.7
TRNP1Q6NT89 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRNP1Q6NT89 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.42■□□□□ 0.7
TRNP1Q6NT89 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRNP1Q6NT89 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.42■□□□□ 0.7
TRNP1Q6NT89 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.42■□□□□ 0.7
TRNP1Q6NT89 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRNP1Q6NT89 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
TRNP1Q6NT89 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.42■□□□□ 0.7
TRNP1Q6NT89 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.42■□□□□ 0.7
TRNP1Q6NT89 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRNP1Q6NT89 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRNP1Q6NT89 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRNP1Q6NT89 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRNP1Q6NT89 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRNP1Q6NT89 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRNP1Q6NT89 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.42■□□□□ 0.7
TRNP1Q6NT89 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRNP1Q6NT89 AC112777.1-201ENST00000540175 1423 ntBASIC19.42■□□□□ 0.7
TRNP1Q6NT89 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRNP1Q6NT89 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.41■□□□□ 0.7
TRNP1Q6NT89 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRNP1Q6NT89 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.41■□□□□ 0.7
TRNP1Q6NT89 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRNP1Q6NT89 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.41■□□□□ 0.7
TRNP1Q6NT89 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TRNP1Q6NT89 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRNP1Q6NT89 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRNP1Q6NT89 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRNP1Q6NT89 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRNP1Q6NT89 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.41■□□□□ 0.7
TRNP1Q6NT89 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRNP1Q6NT89 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.41■□□□□ 0.7
TRNP1Q6NT89 ECEL1P3-201ENST00000427961 737 ntBASIC19.41■□□□□ 0.7
TRNP1Q6NT89 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.41■□□□□ 0.7
TRNP1Q6NT89 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.41■□□□□ 0.7
TRNP1Q6NT89 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRNP1Q6NT89 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.41■□□□□ 0.7
TRNP1Q6NT89 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRNP1Q6NT89 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.41■□□□□ 0.7
TRNP1Q6NT89 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.41■□□□□ 0.7
TRNP1Q6NT89 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
TRNP1Q6NT89 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRNP1Q6NT89 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TRNP1Q6NT89 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRNP1Q6NT89 HOXB1-202ENST00000577092 1414 ntBASIC19.41■□□□□ 0.7
TRNP1Q6NT89 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.41■□□□□ 0.7
TRNP1Q6NT89 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRNP1Q6NT89 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRNP1Q6NT89 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRNP1Q6NT89 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRNP1Q6NT89 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRNP1Q6NT89 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRNP1Q6NT89 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.4■□□□□ 0.7
TRNP1Q6NT89 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRNP1Q6NT89 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TRNP1Q6NT89 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRNP1Q6NT89 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRNP1Q6NT89 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRNP1Q6NT89 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms