Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCRAQ6ISU1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PTCRAQ6ISU1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTCRAQ6ISU1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTCRAQ6ISU1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTCRAQ6ISU1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTCRAQ6ISU1 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTCRAQ6ISU1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTCRAQ6ISU1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PTCRAQ6ISU1 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.21■□□□□ 0.67
PTCRAQ6ISU1 RPS2P1-201ENST00000434010 821 ntBASIC19.21■□□□□ 0.67
PTCRAQ6ISU1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.21■□□□□ 0.67
PTCRAQ6ISU1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PTCRAQ6ISU1 AP001269.4-201ENST00000609611 512 ntBASIC19.21■□□□□ 0.67
PTCRAQ6ISU1 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PTCRAQ6ISU1 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.21■□□□□ 0.67
PTCRAQ6ISU1 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTCRAQ6ISU1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.21■□□□□ 0.67
PTCRAQ6ISU1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.21■□□□□ 0.67
PTCRAQ6ISU1 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PTCRAQ6ISU1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PTCRAQ6ISU1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PTCRAQ6ISU1 AC020907.5-201ENST00000624372 1936 ntBASIC19.21■□□□□ 0.67
PTCRAQ6ISU1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.21■□□□□ 0.67
PTCRAQ6ISU1 KRT18P28-201ENST00000453838 1332 ntBASIC19.21■□□□□ 0.67
PTCRAQ6ISU1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTCRAQ6ISU1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
PTCRAQ6ISU1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTCRAQ6ISU1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTCRAQ6ISU1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTCRAQ6ISU1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTCRAQ6ISU1 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.2■□□□□ 0.66
PTCRAQ6ISU1 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTCRAQ6ISU1 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.2■□□□□ 0.66
PTCRAQ6ISU1 HTR5BP-201ENST00000430851 1154 ntBASIC19.2■□□□□ 0.66
PTCRAQ6ISU1 RNA5SP415-201ENST00000517246 115 ntBASIC19.2■□□□□ 0.66
PTCRAQ6ISU1 AC021087.4-201ENST00000563761 564 ntBASIC19.2■□□□□ 0.66
PTCRAQ6ISU1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.2■□□□□ 0.66
PTCRAQ6ISU1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.2■□□□□ 0.66
PTCRAQ6ISU1 AC034236.2-201ENST00000606662 1610 ntBASIC19.2■□□□□ 0.66
PTCRAQ6ISU1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTCRAQ6ISU1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PTCRAQ6ISU1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.2■□□□□ 0.66
PTCRAQ6ISU1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.2■□□□□ 0.66
PTCRAQ6ISU1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
PTCRAQ6ISU1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTCRAQ6ISU1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTCRAQ6ISU1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTCRAQ6ISU1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCRAQ6ISU1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCRAQ6ISU1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCRAQ6ISU1 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PTCRAQ6ISU1 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCRAQ6ISU1 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.19■□□□□ 0.66
PTCRAQ6ISU1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.19■□□□□ 0.66
PTCRAQ6ISU1 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.19■□□□□ 0.66
PTCRAQ6ISU1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.19■□□□□ 0.66
PTCRAQ6ISU1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.19■□□□□ 0.66
PTCRAQ6ISU1 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.19■□□□□ 0.66
PTCRAQ6ISU1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.19■□□□□ 0.66
PTCRAQ6ISU1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.19■□□□□ 0.66
PTCRAQ6ISU1 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.19■□□□□ 0.66
PTCRAQ6ISU1 AC006333.2-201ENST00000607957 2099 ntBASIC19.19■□□□□ 0.66
PTCRAQ6ISU1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCRAQ6ISU1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PTCRAQ6ISU1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCRAQ6ISU1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCRAQ6ISU1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.18■□□□□ 0.66
PTCRAQ6ISU1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PTCRAQ6ISU1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCRAQ6ISU1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTCRAQ6ISU1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.18■□□□□ 0.66
PTCRAQ6ISU1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCRAQ6ISU1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCRAQ6ISU1 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.18■□□□□ 0.66
PTCRAQ6ISU1 TP73-AS1-210ENST00000637775 1455 ntBASIC19.18■□□□□ 0.66
PTCRAQ6ISU1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCRAQ6ISU1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCRAQ6ISU1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms