Protein–RNA interactions for Protein: Q68CR1

SEL1L3, Protein sel-1 homolog 3, humanhuman

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3Q68CR1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEL1L3Q68CR1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEL1L3Q68CR1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEL1L3Q68CR1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEL1L3Q68CR1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SEL1L3Q68CR1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEL1L3Q68CR1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.04■□□□□ 0.64
SEL1L3Q68CR1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SEL1L3Q68CR1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SEL1L3Q68CR1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEL1L3Q68CR1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SEL1L3Q68CR1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SEL1L3Q68CR1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SEL1L3Q68CR1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.02■□□□□ 0.64
SEL1L3Q68CR1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEL1L3Q68CR1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEL1L3Q68CR1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SEL1L3Q68CR1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEL1L3Q68CR1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.02■□□□□ 0.64
SEL1L3Q68CR1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.02■□□□□ 0.64
SEL1L3Q68CR1 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SEL1L3Q68CR1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SEL1L3Q68CR1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEL1L3Q68CR1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEL1L3Q68CR1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEL1L3Q68CR1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SEL1L3Q68CR1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
SEL1L3Q68CR1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
SEL1L3Q68CR1 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.02■□□□□ 0.64
SEL1L3Q68CR1 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEL1L3Q68CR1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.02■□□□□ 0.64
SEL1L3Q68CR1 AC141257.4-201ENST00000634557 245 ntBASIC19.02■□□□□ 0.64
SEL1L3Q68CR1 AC136944.6-201ENST00000634818 245 ntBASIC19.02■□□□□ 0.64
SEL1L3Q68CR1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEL1L3Q68CR1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEL1L3Q68CR1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEL1L3Q68CR1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SEL1L3Q68CR1 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.02■□□□□ 0.63
SEL1L3Q68CR1 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.63
SEL1L3Q68CR1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SEL1L3Q68CR1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SEL1L3Q68CR1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SEL1L3Q68CR1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 AC141586.3-201ENST00000562166 1838 ntBASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEL1L3Q68CR1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms