Protein–RNA interactions for Protein: Q5VSY0

GKAP1, G kinase-anchoring protein 1, humanhuman

Predicted RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GKAP1Q5VSY0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.7■□□□□ 0.58
GKAP1Q5VSY0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.7■□□□□ 0.58
GKAP1Q5VSY0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.7■□□□□ 0.58
GKAP1Q5VSY0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GKAP1Q5VSY0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.7■□□□□ 0.58
GKAP1Q5VSY0 AL139384.1-201ENST00000612143 3047 ntBASIC18.7■□□□□ 0.58
GKAP1Q5VSY0 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
GKAP1Q5VSY0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GKAP1Q5VSY0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GKAP1Q5VSY0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GKAP1Q5VSY0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.7■□□□□ 0.58
GKAP1Q5VSY0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GKAP1Q5VSY0 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.7■□□□□ 0.58
GKAP1Q5VSY0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.7■□□□□ 0.58
GKAP1Q5VSY0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GKAP1Q5VSY0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.7■□□□□ 0.58
GKAP1Q5VSY0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.7■□□□□ 0.58
GKAP1Q5VSY0 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GKAP1Q5VSY0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.7■□□□□ 0.58
GKAP1Q5VSY0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GKAP1Q5VSY0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.7■□□□□ 0.58
GKAP1Q5VSY0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GKAP1Q5VSY0 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GKAP1Q5VSY0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
GKAP1Q5VSY0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
GKAP1Q5VSY0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GKAP1Q5VSY0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GKAP1Q5VSY0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.68■□□□□ 0.58
GKAP1Q5VSY0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.68■□□□□ 0.58
GKAP1Q5VSY0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GKAP1Q5VSY0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GKAP1Q5VSY0 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
GKAP1Q5VSY0 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GKAP1Q5VSY0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GKAP1Q5VSY0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
GKAP1Q5VSY0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
GKAP1Q5VSY0 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
GKAP1Q5VSY0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.68■□□□□ 0.58
GKAP1Q5VSY0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GKAP1Q5VSY0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.68■□□□□ 0.58
GKAP1Q5VSY0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GKAP1Q5VSY0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GKAP1Q5VSY0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.68■□□□□ 0.58
GKAP1Q5VSY0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.68■□□□□ 0.58
GKAP1Q5VSY0 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.68■□□□□ 0.58
GKAP1Q5VSY0 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GKAP1Q5VSY0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
GKAP1Q5VSY0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GKAP1Q5VSY0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GKAP1Q5VSY0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GKAP1Q5VSY0 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GKAP1Q5VSY0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
GKAP1Q5VSY0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.68■□□□□ 0.58
GKAP1Q5VSY0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.67■□□□□ 0.58
GKAP1Q5VSY0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
GKAP1Q5VSY0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GKAP1Q5VSY0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.67■□□□□ 0.58
GKAP1Q5VSY0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GKAP1Q5VSY0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GKAP1Q5VSY0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.67■□□□□ 0.58
GKAP1Q5VSY0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.67■□□□□ 0.58
GKAP1Q5VSY0 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GKAP1Q5VSY0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.67■□□□□ 0.58
GKAP1Q5VSY0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
GKAP1Q5VSY0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GKAP1Q5VSY0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GKAP1Q5VSY0 AL162412.1-201ENST00000567129 965 ntBASIC18.67■□□□□ 0.58
GKAP1Q5VSY0 AC100791.3-201ENST00000617619 330 ntBASIC18.67■□□□□ 0.58
GKAP1Q5VSY0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
GKAP1Q5VSY0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GKAP1Q5VSY0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms