Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 UNC93B4-201ENST00000505679 747 ntBASIC18.86■□□□□ 0.61
LGSNQ5TDP6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LGSNQ5TDP6 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LGSNQ5TDP6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.85■□□□□ 0.61
LGSNQ5TDP6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
LGSNQ5TDP6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.85■□□□□ 0.61
LGSNQ5TDP6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.85■□□□□ 0.61
LGSNQ5TDP6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LGSNQ5TDP6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LGSNQ5TDP6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LGSNQ5TDP6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
LGSNQ5TDP6 POM121L13P-201ENST00000422362 380 ntBASIC18.85■□□□□ 0.61
LGSNQ5TDP6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LGSNQ5TDP6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LGSNQ5TDP6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.85■□□□□ 0.61
LGSNQ5TDP6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LGSNQ5TDP6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
LGSNQ5TDP6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LGSNQ5TDP6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.85■□□□□ 0.61
LGSNQ5TDP6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
LGSNQ5TDP6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LGSNQ5TDP6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LGSNQ5TDP6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LGSNQ5TDP6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LGSNQ5TDP6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LGSNQ5TDP6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LGSNQ5TDP6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 AC112777.1-201ENST00000540175 1423 ntBASIC18.84■□□□□ 0.61
LGSNQ5TDP6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 AC083880.1-201ENST00000608266 535 ntBASIC18.84■□□□□ 0.61
LGSNQ5TDP6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LGSNQ5TDP6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LGSNQ5TDP6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LGSNQ5TDP6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LGSNQ5TDP6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
LGSNQ5TDP6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.83■□□□□ 0.6
LGSNQ5TDP6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.83■□□□□ 0.6
LGSNQ5TDP6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.83■□□□□ 0.6
LGSNQ5TDP6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LGSNQ5TDP6 AC068587.9-201ENST00000641814 219 ntBASIC18.83■□□□□ 0.6
LGSNQ5TDP6 AC133041.1-202ENST00000642053 222 ntBASIC18.83■□□□□ 0.6
LGSNQ5TDP6 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LGSNQ5TDP6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms