Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LRIF1Q5T3J3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRIF1Q5T3J3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRIF1Q5T3J3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRIF1Q5T3J3 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.63■□□□□ 0.41
LRIF1Q5T3J3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.63■□□□□ 0.41
LRIF1Q5T3J3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.63■□□□□ 0.41
LRIF1Q5T3J3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRIF1Q5T3J3 RNA5SP413-201ENST00000516373 109 ntBASIC17.63■□□□□ 0.41
LRIF1Q5T3J3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.63■□□□□ 0.41
LRIF1Q5T3J3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRIF1Q5T3J3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRIF1Q5T3J3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRIF1Q5T3J3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRIF1Q5T3J3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRIF1Q5T3J3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.63■□□□□ 0.41
LRIF1Q5T3J3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.63■□□□□ 0.41
LRIF1Q5T3J3 AP000997.3-201ENST00000623333 2250 ntBASIC17.63■□□□□ 0.41
LRIF1Q5T3J3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 AC008556.1-201ENST00000610908 2040 ntBASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 KRT18P41-201ENST00000518924 1277 ntBASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 AC110285.5-201ENST00000611501 352 ntBASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 RCC2P3-201ENST00000418112 1537 ntBASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRIF1Q5T3J3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 AC020763.4-201ENST00000623414 4170 ntBASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 AC090192.1-201ENST00000517740 490 ntBASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 HTR7P1-201ENST00000538670 1336 ntBASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
LRIF1Q5T3J3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.6■□□□□ 0.41
LRIF1Q5T3J3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRIF1Q5T3J3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRIF1Q5T3J3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
LRIF1Q5T3J3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRIF1Q5T3J3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.6■□□□□ 0.41
LRIF1Q5T3J3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LRIF1Q5T3J3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRIF1Q5T3J3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.6■□□□□ 0.41
LRIF1Q5T3J3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRIF1Q5T3J3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRIF1Q5T3J3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRIF1Q5T3J3 AC004951.3-201ENST00000418645 1148 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms