Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.5■□□□□ 0.71
ATP13A4Q4VNC1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 AC026471.5-201ENST00000615068 467 ntBASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATP13A4Q4VNC1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 AL354751.1-201ENST00000412768 1863 ntBASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 TSPY7P-201ENST00000431358 1114 ntBASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 AL355355.2-201ENST00000442321 338 ntBASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 AC008550.1-201ENST00000511500 884 ntBASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 AP001412.1-201ENST00000608405 714 ntBASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP13A4Q4VNC1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 GPAT2P1-201ENST00000444924 1672 ntBASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 CRYGFP-201ENST00000418459 633 ntBASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 AP003071.4-201ENST00000562276 1284 ntBASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP13A4Q4VNC1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATP13A4Q4VNC1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms