Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM71Q2Q1W2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM71Q2Q1W2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
TRIM71Q2Q1W2 AC141586.3-201ENST00000562166 1838 ntBASIC20.37■□□□□ 0.85
TRIM71Q2Q1W2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 KRT16P4-201ENST00000453883 522 ntBASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 AP005901.3-202ENST00000581653 237 ntBASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM71Q2Q1W2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 AKR1C7P-201ENST00000305623 895 ntBASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 AC091607.1-201ENST00000490318 1060 ntBASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 AC099336.1-202ENST00000602961 463 ntBASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.35■□□□□ 0.85
TRIM71Q2Q1W2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TRIM71Q2Q1W2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
TRIM71Q2Q1W2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM71Q2Q1W2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.34■□□□□ 0.85
TRIM71Q2Q1W2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM71Q2Q1W2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM71Q2Q1W2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.34■□□□□ 0.85
TRIM71Q2Q1W2 Z69720.1-201ENST00000601483 472 ntBASIC20.34■□□□□ 0.85
TRIM71Q2Q1W2 AL353801.3-201ENST00000609898 542 ntBASIC20.34■□□□□ 0.85
TRIM71Q2Q1W2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM71Q2Q1W2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM71Q2Q1W2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM71Q2Q1W2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.34■□□□□ 0.85
TRIM71Q2Q1W2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM71Q2Q1W2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM71Q2Q1W2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM71Q2Q1W2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TRIM71Q2Q1W2 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM71Q2Q1W2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.33■□□□□ 0.85
TRIM71Q2Q1W2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM71Q2Q1W2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
TRIM71Q2Q1W2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM71Q2Q1W2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM71Q2Q1W2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.33■□□□□ 0.85
TRIM71Q2Q1W2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM71Q2Q1W2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.33■□□□□ 0.85
TRIM71Q2Q1W2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.33■□□□□ 0.85
TRIM71Q2Q1W2 LINC01711-201ENST00000598340 967 ntBASIC20.33■□□□□ 0.85
TRIM71Q2Q1W2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.33■□□□□ 0.85
TRIM71Q2Q1W2 AL121912.1-201ENST00000603683 238 ntBASIC20.33■□□□□ 0.85
TRIM71Q2Q1W2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms