Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC32.84■■■□□ 2.85
HMGXB3Q12766 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC32.84■■■□□ 2.85
HMGXB3Q12766 KRT8P50-201ENST00000562022 1438 ntBASIC32.84■■■□□ 2.85
HMGXB3Q12766 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
HMGXB3Q12766 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC32.84■■■□□ 2.85
HMGXB3Q12766 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
HMGXB3Q12766 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC32.84■■■□□ 2.85
HMGXB3Q12766 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC32.84■■■□□ 2.85
HMGXB3Q12766 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
HMGXB3Q12766 RPS2P28-201ENST00000314255 741 ntBASIC32.83■■■□□ 2.85
HMGXB3Q12766 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
HMGXB3Q12766 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
HMGXB3Q12766 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC32.83■■■□□ 2.85
HMGXB3Q12766 HS6ST1P1-201ENST00000481504 1234 ntBASIC32.83■■■□□ 2.85
HMGXB3Q12766 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC32.83■■■□□ 2.85
HMGXB3Q12766 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC32.83■■■□□ 2.85
HMGXB3Q12766 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
HMGXB3Q12766 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
HMGXB3Q12766 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.85
HMGXB3Q12766 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC32.82■■■□□ 2.85
HMGXB3Q12766 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC32.82■■■□□ 2.85
HMGXB3Q12766 RNA5SP415-201ENST00000517246 115 ntBASIC32.82■■■□□ 2.85
HMGXB3Q12766 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC32.82■■■□□ 2.85
HMGXB3Q12766 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC32.82■■■□□ 2.85
HMGXB3Q12766 AL139288.1-201ENST00000623748 933 ntBASIC32.82■■■□□ 2.85
HMGXB3Q12766 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC32.82■■■□□ 2.84
HMGXB3Q12766 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC32.82■■■□□ 2.84
HMGXB3Q12766 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
HMGXB3Q12766 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
HMGXB3Q12766 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
HMGXB3Q12766 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
HMGXB3Q12766 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
HMGXB3Q12766 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC32.82■■■□□ 2.84
HMGXB3Q12766 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
HMGXB3Q12766 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC32.82■■■□□ 2.84
HMGXB3Q12766 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC32.82■■■□□ 2.84
HMGXB3Q12766 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
HMGXB3Q12766 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC32.82■■■□□ 2.84
HMGXB3Q12766 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
HMGXB3Q12766 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
HMGXB3Q12766 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC32.81■■■□□ 2.84
HMGXB3Q12766 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC32.81■■■□□ 2.84
HMGXB3Q12766 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC32.81■■■□□ 2.84
HMGXB3Q12766 KRT18P3-201ENST00000451602 1288 ntBASIC32.81■■■□□ 2.84
HMGXB3Q12766 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC32.81■■■□□ 2.84
HMGXB3Q12766 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC32.81■■■□□ 2.84
HMGXB3Q12766 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
HMGXB3Q12766 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC32.8■■■□□ 2.84
HMGXB3Q12766 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
HMGXB3Q12766 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC32.8■■■□□ 2.84
HMGXB3Q12766 HLA-J-201ENST00000462773 1622 ntBASIC32.8■■■□□ 2.84
HMGXB3Q12766 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
HMGXB3Q12766 PMP22-202ENST00000395936 816 ntTSL 3 BASIC32.8■■■□□ 2.84
HMGXB3Q12766 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
HMGXB3Q12766 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC32.8■■■□□ 2.84
HMGXB3Q12766 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
HMGXB3Q12766 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
HMGXB3Q12766 AC068587.9-201ENST00000641814 219 ntBASIC32.8■■■□□ 2.84
HMGXB3Q12766 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
HMGXB3Q12766 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC32.8■■■□□ 2.84
HMGXB3Q12766 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC32.79■■■□□ 2.84
HMGXB3Q12766 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
HMGXB3Q12766 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
HMGXB3Q12766 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
HMGXB3Q12766 COA5-202ENST00000409997 557 ntTSL 4 BASIC32.79■■■□□ 2.84
HMGXB3Q12766 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
HMGXB3Q12766 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC32.79■■■□□ 2.84
HMGXB3Q12766 AC011467.2-201ENST00000598425 242 ntBASIC32.79■■■□□ 2.84
HMGXB3Q12766 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC32.79■■■□□ 2.84
HMGXB3Q12766 Z82202.1-201ENST00000623446 1880 ntBASIC32.79■■■□□ 2.84
HMGXB3Q12766 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC32.79■■■□□ 2.84
HMGXB3Q12766 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC32.79■■■□□ 2.84
HMGXB3Q12766 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC32.79■■■□□ 2.84
HMGXB3Q12766 AL357033.4-201ENST00000617703 1807 ntBASIC32.79■■■□□ 2.84
HMGXB3Q12766 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC32.78■■■□□ 2.84
HMGXB3Q12766 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
HMGXB3Q12766 DANCR-204ENST00000444958 709 ntTSL 3 BASIC32.78■■■□□ 2.84
HMGXB3Q12766 AC092910.1-201ENST00000482027 1129 ntBASIC32.78■■■□□ 2.84
HMGXB3Q12766 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
HMGXB3Q12766 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
HMGXB3Q12766 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
HMGXB3Q12766 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
HMGXB3Q12766 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC32.78■■■□□ 2.84
HMGXB3Q12766 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
HMGXB3Q12766 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC32.78■■■□□ 2.84
HMGXB3Q12766 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC32.78■■■□□ 2.84
HMGXB3Q12766 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC32.78■■■□□ 2.84
HMGXB3Q12766 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC32.77■■■□□ 2.84
HMGXB3Q12766 KRT18P41-201ENST00000518924 1277 ntBASIC32.77■■■□□ 2.84
HMGXB3Q12766 OR7E14P-202ENST00000530490 1290 ntBASIC32.77■■■□□ 2.84
HMGXB3Q12766 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
HMGXB3Q12766 AC002347.1-201ENST00000569543 541 ntBASIC32.77■■■□□ 2.84
HMGXB3Q12766 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC32.77■■■□□ 2.84
HMGXB3Q12766 AP005117.1-201ENST00000584346 1413 ntBASIC32.77■■■□□ 2.84
HMGXB3Q12766 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
HMGXB3Q12766 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
HMGXB3Q12766 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
HMGXB3Q12766 GABARAPL3-202ENST00000624044 1851 ntBASIC32.77■■■□□ 2.84
HMGXB3Q12766 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC32.77■■■□□ 2.84
HMGXB3Q12766 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC32.77■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms