Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH1Q08174 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH1Q08174 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH1Q08174 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCDH1Q08174 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH1Q08174 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH1Q08174 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PCDH1Q08174 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH1Q08174 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH1Q08174 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDH1Q08174 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH1Q08174 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH1Q08174 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDH1Q08174 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH1Q08174 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDH1Q08174 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PCDH1Q08174 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDH1Q08174 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PCDH1Q08174 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDH1Q08174 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH1Q08174 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PCDH1Q08174 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDH1Q08174 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH1Q08174 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
PCDH1Q08174 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDH1Q08174 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH1Q08174 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH1Q08174 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH1Q08174 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH1Q08174 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH1Q08174 AC005082.1-201ENST00000413042 2259 ntBASIC18.02■□□□□ 0.47
PCDH1Q08174 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.02■□□□□ 0.47
PCDH1Q08174 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH1Q08174 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH1Q08174 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH1Q08174 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH1Q08174 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH1Q08174 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH1Q08174 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
PCDH1Q08174 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH1Q08174 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
PCDH1Q08174 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH1Q08174 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH1Q08174 AC020763.4-201ENST00000623414 4170 ntBASIC18.01■□□□□ 0.47
PCDH1Q08174 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH1Q08174 AC079598.2-202ENST00000546624 1451 ntBASIC18.01■□□□□ 0.47
PCDH1Q08174 LETM1P2-201ENST00000597330 2178 ntBASIC18.01■□□□□ 0.47
PCDH1Q08174 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH1Q08174 KRT17P2-201ENST00000300992 1314 ntBASIC18.01■□□□□ 0.47
PCDH1Q08174 AC009113.1-201ENST00000570267 2443 ntBASIC18.01■□□□□ 0.47
PCDH1Q08174 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PCDH1Q08174 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH1Q08174 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH1Q08174 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH1Q08174 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDH1Q08174 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH1Q08174 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDH1Q08174 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDH1Q08174 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDH1Q08174 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH1Q08174 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDH1Q08174 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
PCDH1Q08174 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.01■□□□□ 0.47
PCDH1Q08174 AL353719.1-201ENST00000566847 864 ntBASIC18.01■□□□□ 0.47
PCDH1Q08174 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH1Q08174 AC066615.1-201ENST00000640911 628 ntBASIC18.01■□□□□ 0.47
PCDH1Q08174 GPAT2P1-201ENST00000444924 1672 ntBASIC18.01■□□□□ 0.47
PCDH1Q08174 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH1Q08174 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDH1Q08174 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH1Q08174 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH1Q08174 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.01■□□□□ 0.47
PCDH1Q08174 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDH1Q08174 AC008556.1-201ENST00000610908 2040 ntBASIC18.01■□□□□ 0.47
PCDH1Q08174 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH1Q08174 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH1Q08174 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH1Q08174 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH1Q08174 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH1Q08174 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH1Q08174 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PCDH1Q08174 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH1Q08174 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18■□□□□ 0.47
PCDH1Q08174 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18■□□□□ 0.47
PCDH1Q08174 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
PCDH1Q08174 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDH1Q08174 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH1Q08174 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18■□□□□ 0.47
PCDH1Q08174 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18■□□□□ 0.47
PCDH1Q08174 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18■□□□□ 0.47
PCDH1Q08174 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PCDH1Q08174 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH1Q08174 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18■□□□□ 0.47
PCDH1Q08174 TSPY7P-201ENST00000431358 1114 ntBASIC18■□□□□ 0.47
PCDH1Q08174 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18■□□□□ 0.47
PCDH1Q08174 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH1Q08174 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18■□□□□ 0.47
PCDH1Q08174 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18■□□□□ 0.47
PCDH1Q08174 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDH1Q08174 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms