Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC3A1Q07837 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC3A1Q07837 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC3A1Q07837 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC3A1Q07837 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC3A1Q07837 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC3A1Q07837 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SLC3A1Q07837 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC3A1Q07837 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC3A1Q07837 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC3A1Q07837 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC3A1Q07837 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC3A1Q07837 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SLC3A1Q07837 ABALON-201ENST00000629058 1903 ntBASIC16.81■□□□□ 0.28
SLC3A1Q07837 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC3A1Q07837 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SLC3A1Q07837 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC3A1Q07837 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC3A1Q07837 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC3A1Q07837 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.81■□□□□ 0.28
SLC3A1Q07837 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC3A1Q07837 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC3A1Q07837 AL121829.2-201ENST00000620908 328 ntBASIC16.81■□□□□ 0.28
SLC3A1Q07837 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.81■□□□□ 0.28
SLC3A1Q07837 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC3A1Q07837 AC083906.6-201ENST00000641366 219 ntBASIC16.81■□□□□ 0.28
SLC3A1Q07837 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC3A1Q07837 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC3A1Q07837 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC3A1Q07837 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SLC3A1Q07837 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC3A1Q07837 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC3A1Q07837 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SLC3A1Q07837 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC3A1Q07837 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC3A1Q07837 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC3A1Q07837 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC3A1Q07837 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC3A1Q07837 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC3A1Q07837 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC3A1Q07837 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC3A1Q07837 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC3A1Q07837 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC3A1Q07837 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC3A1Q07837 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC3A1Q07837 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC3A1Q07837 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC3A1Q07837 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
SLC3A1Q07837 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC3A1Q07837 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SLC3A1Q07837 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SLC3A1Q07837 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC3A1Q07837 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC3A1Q07837 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC3A1Q07837 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC3A1Q07837 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC3A1Q07837 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC3A1Q07837 AC239809.2-201ENST00000415381 517 ntBASIC16.8■□□□□ 0.28
SLC3A1Q07837 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC3A1Q07837 AC098590.1-201ENST00000468126 897 ntBASIC16.8■□□□□ 0.28
SLC3A1Q07837 RPS2P52-201ENST00000469610 820 ntBASIC16.8■□□□□ 0.28
SLC3A1Q07837 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC3A1Q07837 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC3A1Q07837 RPPH1-201ENST00000516869 333 ntBASIC16.8■□□□□ 0.28
SLC3A1Q07837 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC3A1Q07837 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC3A1Q07837 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
SLC3A1Q07837 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC3A1Q07837 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC3A1Q07837 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC3A1Q07837 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SLC3A1Q07837 AP000997.3-201ENST00000623333 2250 ntBASIC16.8■□□□□ 0.28
SLC3A1Q07837 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC3A1Q07837 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC3A1Q07837 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC3A1Q07837 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLC3A1Q07837 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLC3A1Q07837 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC3A1Q07837 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC3A1Q07837 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLC3A1Q07837 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC3A1Q07837 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SLC3A1Q07837 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC3A1Q07837 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC3A1Q07837 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC3A1Q07837 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC3A1Q07837 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC3A1Q07837 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
SLC3A1Q07837 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC3A1Q07837 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC3A1Q07837 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC3A1Q07837 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC3A1Q07837 YBX1P10-201ENST00000444752 975 ntBASIC16.79■□□□□ 0.28
SLC3A1Q07837 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC3A1Q07837 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC3A1Q07837 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC3A1Q07837 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC3A1Q07837 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC3A1Q07837 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC3A1Q07837 MTDHP1-201ENST00000605323 784 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms