Protein–RNA interactions for Protein: P78414

IRX1, Iroquois-class homeodomain protein IRX-1, humanhuman

Predicted RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX1P78414 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
IRX1P78414 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IRX1P78414 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.37■□□□□ 0.53
IRX1P78414 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.37■□□□□ 0.53
IRX1P78414 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IRX1P78414 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IRX1P78414 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
IRX1P78414 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.37■□□□□ 0.53
IRX1P78414 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IRX1P78414 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IRX1P78414 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.36■□□□□ 0.53
IRX1P78414 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IRX1P78414 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
IRX1P78414 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IRX1P78414 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IRX1P78414 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
IRX1P78414 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IRX1P78414 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.36■□□□□ 0.53
IRX1P78414 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.36■□□□□ 0.53
IRX1P78414 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IRX1P78414 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
IRX1P78414 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
IRX1P78414 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.36■□□□□ 0.53
IRX1P78414 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IRX1P78414 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IRX1P78414 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
IRX1P78414 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.36■□□□□ 0.53
IRX1P78414 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.36■□□□□ 0.53
IRX1P78414 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
IRX1P78414 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IRX1P78414 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
IRX1P78414 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
IRX1P78414 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.36■□□□□ 0.53
IRX1P78414 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.36■□□□□ 0.53
IRX1P78414 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.36■□□□□ 0.53
IRX1P78414 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.36■□□□□ 0.53
IRX1P78414 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.36■□□□□ 0.53
IRX1P78414 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
IRX1P78414 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IRX1P78414 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.36■□□□□ 0.53
IRX1P78414 AC073592.3-201ENST00000625118 1834 ntBASIC18.36■□□□□ 0.53
IRX1P78414 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
IRX1P78414 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IRX1P78414 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IRX1P78414 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
IRX1P78414 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX1P78414 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
IRX1P78414 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.35■□□□□ 0.53
IRX1P78414 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
IRX1P78414 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX1P78414 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX1P78414 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX1P78414 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
IRX1P78414 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX1P78414 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX1P78414 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.35■□□□□ 0.53
IRX1P78414 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX1P78414 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX1P78414 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX1P78414 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX1P78414 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX1P78414 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IRX1P78414 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX1P78414 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IRX1P78414 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
IRX1P78414 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.35■□□□□ 0.53
IRX1P78414 TUBB8P6-201ENST00000436895 1288 ntBASIC18.35■□□□□ 0.53
IRX1P78414 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.35■□□□□ 0.53
IRX1P78414 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
IRX1P78414 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
IRX1P78414 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.35■□□□□ 0.53
IRX1P78414 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX1P78414 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX1P78414 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX1P78414 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IRX1P78414 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
IRX1P78414 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX1P78414 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
IRX1P78414 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
IRX1P78414 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IRX1P78414 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.34■□□□□ 0.53
IRX1P78414 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
IRX1P78414 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.34■□□□□ 0.53
IRX1P78414 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IRX1P78414 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IRX1P78414 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
IRX1P78414 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IRX1P78414 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.34■□□□□ 0.53
IRX1P78414 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.34■□□□□ 0.53
IRX1P78414 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
IRX1P78414 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IRX1P78414 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
IRX1P78414 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.34■□□□□ 0.53
IRX1P78414 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
IRX1P78414 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
IRX1P78414 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
IRX1P78414 AC026185.1-201ENST00000445748 174 ntBASIC18.34■□□□□ 0.53
IRX1P78414 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.34■□□□□ 0.53
IRX1P78414 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
IRX1P78414 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms