Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D3P61077 KRT8P41-201ENST00000533985 1514 ntBASIC13.31□□□□□ -0.28
UBE2D3P61077 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D3P61077 ID1-201ENST00000376105 1233 ntBASIC13.31□□□□□ -0.28
UBE2D3P61077 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D3P61077 KRASP1-201ENST00000407852 552 ntBASIC13.31□□□□□ -0.28
UBE2D3P61077 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC13.31□□□□□ -0.28
UBE2D3P61077 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.31□□□□□ -0.28
UBE2D3P61077 KRT16P5-201ENST00000455284 522 ntBASIC13.31□□□□□ -0.28
UBE2D3P61077 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D3P61077 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
UBE2D3P61077 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC13.31□□□□□ -0.28
UBE2D3P61077 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D3P61077 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
UBE2D3P61077 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.31□□□□□ -0.28
UBE2D3P61077 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D3P61077 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D3P61077 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D3P61077 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC13.31□□□□□ -0.28
UBE2D3P61077 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D3P61077 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC13.31□□□□□ -0.28
UBE2D3P61077 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D3P61077 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D3P61077 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.3□□□□□ -0.28
UBE2D3P61077 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D3P61077 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13.3□□□□□ -0.28
UBE2D3P61077 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
UBE2D3P61077 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D3P61077 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D3P61077 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
UBE2D3P61077 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC13.3□□□□□ -0.28
UBE2D3P61077 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
UBE2D3P61077 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D3P61077 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D3P61077 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D3P61077 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC13.3□□□□□ -0.28
UBE2D3P61077 GLRB-205ENST00000512619 728 ntTSL 3 BASIC13.3□□□□□ -0.28
UBE2D3P61077 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.3□□□□□ -0.28
UBE2D3P61077 EMC9-206ENST00000560403 872 ntTSL 2 BASIC13.3□□□□□ -0.28
UBE2D3P61077 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D3P61077 AC233263.1-201ENST00000578059 224 ntBASIC13.3□□□□□ -0.28
UBE2D3P61077 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC13.3□□□□□ -0.28
UBE2D3P61077 AL023875.1-201ENST00000640777 796 ntBASIC13.3□□□□□ -0.28
UBE2D3P61077 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D3P61077 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D3P61077 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D3P61077 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
UBE2D3P61077 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D3P61077 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
UBE2D3P61077 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D3P61077 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.3□□□□□ -0.28
UBE2D3P61077 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D3P61077 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D3P61077 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D3P61077 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D3P61077 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
UBE2D3P61077 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D3P61077 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
UBE2D3P61077 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
UBE2D3P61077 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC13.29□□□□□ -0.28
UBE2D3P61077 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC13.29□□□□□ -0.28
UBE2D3P61077 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D3P61077 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D3P61077 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.29□□□□□ -0.28
UBE2D3P61077 BCL2-203ENST00000589955 5011 ntBASIC13.29□□□□□ -0.28
UBE2D3P61077 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC13.29□□□□□ -0.28
UBE2D3P61077 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
UBE2D3P61077 MMAB-206ENST00000540016 945 ntTSL 3 BASIC13.29□□□□□ -0.28
UBE2D3P61077 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC13.29□□□□□ -0.28
UBE2D3P61077 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D3P61077 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
UBE2D3P61077 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
UBE2D3P61077 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.29□□□□□ -0.28
UBE2D3P61077 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC13.29□□□□□ -0.28
UBE2D3P61077 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
UBE2D3P61077 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D3P61077 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D3P61077 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D3P61077 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D3P61077 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D3P61077 AC067852.2-201ENST00000590513 2313 ntBASIC13.29□□□□□ -0.28
UBE2D3P61077 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.29□□□□□ -0.28
UBE2D3P61077 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D3P61077 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
UBE2D3P61077 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.29□□□□□ -0.28
UBE2D3P61077 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
UBE2D3P61077 COBL-210ENST00000632460 1941 ntTSL 5 BASIC13.29□□□□□ -0.28
UBE2D3P61077 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D3P61077 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC13.29□□□□□ -0.28
UBE2D3P61077 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D3P61077 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D3P61077 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D3P61077 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D3P61077 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
UBE2D3P61077 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
UBE2D3P61077 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D3P61077 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D3P61077 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D3P61077 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.28□□□□□ -0.28
UBE2D3P61077 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms