Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC25A1P53007 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
SLC25A1P53007 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC25A1P53007 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC25A1P53007 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SLC25A1P53007 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SLC25A1P53007 RARRES2P10-201ENST00000564312 460 ntBASIC16.62■□□□□ 0.25
SLC25A1P53007 AF186192.3-201ENST00000583427 947 ntBASIC16.62■□□□□ 0.25
SLC25A1P53007 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC25A1P53007 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
SLC25A1P53007 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC25A1P53007 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC25A1P53007 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC25A1P53007 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SLC25A1P53007 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC25A1P53007 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC25A1P53007 AL109659.2-201ENST00000606809 1674 ntBASIC16.62■□□□□ 0.25
SLC25A1P53007 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC25A1P53007 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC25A1P53007 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC25A1P53007 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC25A1P53007 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC25A1P53007 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SLC25A1P53007 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC25A1P53007 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SLC25A1P53007 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
SLC25A1P53007 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC25A1P53007 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SLC25A1P53007 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC25A1P53007 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC25A1P53007 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
SLC25A1P53007 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC25A1P53007 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC25A1P53007 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC25A1P53007 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC25A1P53007 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC25A1P53007 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC25A1P53007 AC026471.1-201ENST00000564629 3026 ntBASIC16.61■□□□□ 0.25
SLC25A1P53007 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC25A1P53007 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC25A1P53007 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SLC25A1P53007 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC25A1P53007 MYLKP1-201ENST00000509077 1580 ntBASIC16.6■□□□□ 0.25
SLC25A1P53007 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC25A1P53007 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC25A1P53007 AC018470.1-201ENST00000624790 3129 ntBASIC16.6■□□□□ 0.25
SLC25A1P53007 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC25A1P53007 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC25A1P53007 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC25A1P53007 AC011506.1-201ENST00000474329 610 ntBASIC16.6■□□□□ 0.25
SLC25A1P53007 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC25A1P53007 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
SLC25A1P53007 C1QBPP2-201ENST00000528754 825 ntBASIC16.6■□□□□ 0.25
SLC25A1P53007 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.6■□□□□ 0.25
SLC25A1P53007 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC25A1P53007 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC25A1P53007 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC25A1P53007 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC25A1P53007 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC25A1P53007 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SLC25A1P53007 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC25A1P53007 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC25A1P53007 AC008556.1-201ENST00000610908 2040 ntBASIC16.6■□□□□ 0.25
SLC25A1P53007 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC25A1P53007 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC25A1P53007 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC25A1P53007 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC25A1P53007 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC25A1P53007 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC25A1P53007 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC25A1P53007 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SLC25A1P53007 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC25A1P53007 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC25A1P53007 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC25A1P53007 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC25A1P53007 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC25A1P53007 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC25A1P53007 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC25A1P53007 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC25A1P53007 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC25A1P53007 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
SLC25A1P53007 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC25A1P53007 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC25A1P53007 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC25A1P53007 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC25A1P53007 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC25A1P53007 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC25A1P53007 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC25A1P53007 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC25A1P53007 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC25A1P53007 B3GAT3P1-201ENST00000471720 806 ntBASIC16.59■□□□□ 0.25
SLC25A1P53007 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC25A1P53007 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.59■□□□□ 0.25
SLC25A1P53007 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC25A1P53007 MIR6786-201ENST00000616843 113 ntBASIC16.59■□□□□ 0.25
SLC25A1P53007 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC25A1P53007 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC25A1P53007 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC25A1P53007 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC25A1P53007 AC068880.1-201ENST00000507289 2297 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms