Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 GAPDHP21-201ENST00000450301 1010 ntBASIC21.07■□□□□ 0.96
LBX1P52954 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC21.07■□□□□ 0.96
LBX1P52954 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.07■□□□□ 0.96
LBX1P52954 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.07■□□□□ 0.96
LBX1P52954 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.07■□□□□ 0.96
LBX1P52954 RPL28-205ENST00000558131 444 ntTSL 5 BASIC21.07■□□□□ 0.96
LBX1P52954 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
LBX1P52954 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LBX1P52954 AL139288.1-201ENST00000623748 933 ntBASIC21.07■□□□□ 0.96
LBX1P52954 AL109659.2-201ENST00000606809 1674 ntBASIC21.07■□□□□ 0.96
LBX1P52954 HEIH-201ENST00000623091 1652 ntBASIC21.07■□□□□ 0.96
LBX1P52954 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LBX1P52954 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.07■□□□□ 0.96
LBX1P52954 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.07■□□□□ 0.96
LBX1P52954 AC007225.1-201ENST00000566331 1836 ntBASIC21.06■□□□□ 0.96
LBX1P52954 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.06■□□□□ 0.96
LBX1P52954 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LBX1P52954 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC21.06■□□□□ 0.96
LBX1P52954 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LBX1P52954 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LBX1P52954 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LBX1P52954 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LBX1P52954 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC21.06■□□□□ 0.96
LBX1P52954 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.06■□□□□ 0.96
LBX1P52954 MEIS3P1-201ENST00000495167 958 ntBASIC21.06■□□□□ 0.96
LBX1P52954 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LBX1P52954 CCND1-203ENST00000536559 553 ntTSL 3 BASIC21.06■□□□□ 0.96
LBX1P52954 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC21.06■□□□□ 0.96
LBX1P52954 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC21.06■□□□□ 0.96
LBX1P52954 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LBX1P52954 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.06■□□□□ 0.96
LBX1P52954 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LBX1P52954 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
LBX1P52954 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LBX1P52954 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.06■□□□□ 0.96
LBX1P52954 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LBX1P52954 AC079834.2-201ENST00000609776 1949 ntBASIC21.06■□□□□ 0.96
LBX1P52954 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.05■□□□□ 0.96
LBX1P52954 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LBX1P52954 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC21.05■□□□□ 0.96
LBX1P52954 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.05■□□□□ 0.96
LBX1P52954 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LBX1P52954 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
LBX1P52954 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LBX1P52954 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LBX1P52954 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC21.05■□□□□ 0.96
LBX1P52954 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LBX1P52954 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC21.05■□□□□ 0.96
LBX1P52954 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LBX1P52954 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC21.05■□□□□ 0.96
LBX1P52954 AC108751.1-201ENST00000490852 363 ntBASIC21.05■□□□□ 0.96
LBX1P52954 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC21.05■□□□□ 0.96
LBX1P52954 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC21.05■□□□□ 0.96
LBX1P52954 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LBX1P52954 DUT-210ENST00000559935 569 ntTSL 3 BASIC21.05■□□□□ 0.96
LBX1P52954 LSM12-202ENST00000585388 942 ntTSL 3 BASIC21.05■□□□□ 0.96
LBX1P52954 NKAPP1-205ENST00000585790 367 ntBASIC21.05■□□□□ 0.96
LBX1P52954 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LBX1P52954 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LBX1P52954 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LBX1P52954 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.05■□□□□ 0.96
LBX1P52954 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LBX1P52954 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LBX1P52954 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
LBX1P52954 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.04■□□□□ 0.96
LBX1P52954 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.04■□□□□ 0.96
LBX1P52954 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.04■□□□□ 0.96
LBX1P52954 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.04■□□□□ 0.96
LBX1P52954 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LBX1P52954 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC21.04■□□□□ 0.96
LBX1P52954 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
LBX1P52954 AJ011932.1-201ENST00000621707 465 ntBASIC21.04■□□□□ 0.96
LBX1P52954 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC21.04■□□□□ 0.96
LBX1P52954 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
LBX1P52954 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LBX1P52954 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LBX1P52954 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LBX1P52954 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.04■□□□□ 0.96
LBX1P52954 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.04■□□□□ 0.96
LBX1P52954 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LBX1P52954 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LBX1P52954 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
LBX1P52954 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.03■□□□□ 0.96
LBX1P52954 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LBX1P52954 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LBX1P52954 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
LBX1P52954 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LBX1P52954 SLC4A1APP2-201ENST00000424054 1259 ntBASIC21.03■□□□□ 0.96
LBX1P52954 LAGE3P1-201ENST00000425356 484 ntBASIC21.03■□□□□ 0.96
LBX1P52954 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.03■□□□□ 0.96
LBX1P52954 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.03■□□□□ 0.96
LBX1P52954 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
LBX1P52954 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LBX1P52954 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
LBX1P52954 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LBX1P52954 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LBX1P52954 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
LBX1P52954 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.03■□□□□ 0.96
LBX1P52954 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC21.03■□□□□ 0.96
LBX1P52954 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms