Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GABRA4P48169 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GABRA4P48169 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
GABRA4P48169 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
GABRA4P48169 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.72■□□□□ 0.43
GABRA4P48169 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GABRA4P48169 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.72■□□□□ 0.43
GABRA4P48169 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GABRA4P48169 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.71■□□□□ 0.43
GABRA4P48169 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GABRA4P48169 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
GABRA4P48169 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GABRA4P48169 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GABRA4P48169 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GABRA4P48169 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GABRA4P48169 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GABRA4P48169 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GABRA4P48169 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
GABRA4P48169 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GABRA4P48169 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GABRA4P48169 HLA-F-220ENST00000434407 884 ntBASIC17.71■□□□□ 0.43
GABRA4P48169 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.71■□□□□ 0.43
GABRA4P48169 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.71■□□□□ 0.43
GABRA4P48169 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.71■□□□□ 0.43
GABRA4P48169 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.71■□□□□ 0.43
GABRA4P48169 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GABRA4P48169 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
GABRA4P48169 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
GABRA4P48169 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
GABRA4P48169 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GABRA4P48169 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
GABRA4P48169 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.71■□□□□ 0.43
GABRA4P48169 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
GABRA4P48169 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.71■□□□□ 0.42
GABRA4P48169 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.71■□□□□ 0.42
GABRA4P48169 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA4P48169 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
GABRA4P48169 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA4P48169 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.7■□□□□ 0.42
GABRA4P48169 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.7■□□□□ 0.42
GABRA4P48169 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.7■□□□□ 0.42
GABRA4P48169 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA4P48169 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.7■□□□□ 0.42
GABRA4P48169 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA4P48169 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA4P48169 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA4P48169 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA4P48169 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA4P48169 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA4P48169 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA4P48169 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA4P48169 VENTXP5-201ENST00000523979 775 ntBASIC17.7■□□□□ 0.42
GABRA4P48169 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.7■□□□□ 0.42
GABRA4P48169 MIR3180-4-201ENST00000582223 153 ntBASIC17.7■□□□□ 0.42
GABRA4P48169 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
GABRA4P48169 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA4P48169 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA4P48169 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA4P48169 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
GABRA4P48169 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.7■□□□□ 0.42
GABRA4P48169 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA4P48169 KRT8P50-201ENST00000562022 1438 ntBASIC17.7■□□□□ 0.42
GABRA4P48169 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA4P48169 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA4P48169 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA4P48169 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
GABRA4P48169 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA4P48169 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
GABRA4P48169 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.7■□□□□ 0.42
GABRA4P48169 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA4P48169 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GABRA4P48169 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
GABRA4P48169 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
GABRA4P48169 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.69■□□□□ 0.42
GABRA4P48169 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.69■□□□□ 0.42
GABRA4P48169 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.69■□□□□ 0.42
GABRA4P48169 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GABRA4P48169 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GABRA4P48169 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.69■□□□□ 0.42
GABRA4P48169 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.69■□□□□ 0.42
GABRA4P48169 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.69■□□□□ 0.42
GABRA4P48169 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
GABRA4P48169 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.69■□□□□ 0.42
GABRA4P48169 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
GABRA4P48169 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
GABRA4P48169 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.69■□□□□ 0.42
GABRA4P48169 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GABRA4P48169 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.69■□□□□ 0.42
GABRA4P48169 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
GABRA4P48169 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GABRA4P48169 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.68■□□□□ 0.42
GABRA4P48169 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GABRA4P48169 AL391807.1-203ENST00000604392 2365 ntBASIC17.68■□□□□ 0.42
GABRA4P48169 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
GABRA4P48169 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GABRA4P48169 IER3-202ENST00000376377 1350 ntBASIC17.68■□□□□ 0.42
GABRA4P48169 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GABRA4P48169 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GABRA4P48169 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
GABRA4P48169 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms