Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AL596275.1-201ENST00000423464 877 ntBASIC18.03■□□□□ 0.48
SLC6A12P48065 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC6A12P48065 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.03■□□□□ 0.48
SLC6A12P48065 AC116562.4-202ENST00000641738 218 ntBASIC18.03■□□□□ 0.48
SLC6A12P48065 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC6A12P48065 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SLC6A12P48065 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC6A12P48065 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SLC6A12P48065 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC6A12P48065 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC6A12P48065 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC6A12P48065 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC6A12P48065 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC6A12P48065 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SLC6A12P48065 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
SLC6A12P48065 CYP2D8P-201ENST00000433633 1490 ntBASIC18.02■□□□□ 0.48
SLC6A12P48065 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.02■□□□□ 0.48
SLC6A12P48065 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SLC6A12P48065 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC6A12P48065 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC6A12P48065 AP000593.1-201ENST00000393668 712 ntBASIC18.02■□□□□ 0.48
SLC6A12P48065 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SLC6A12P48065 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SLC6A12P48065 BX088651.1-201ENST00000540551 451 ntBASIC18.02■□□□□ 0.48
SLC6A12P48065 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC6A12P48065 WWOX-216ENST00000569818 525 ntBASIC18.02■□□□□ 0.48
SLC6A12P48065 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC6A12P48065 CR769767.2-201ENST00000622735 460 ntBASIC18.02■□□□□ 0.48
SLC6A12P48065 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC6A12P48065 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.47
SLC6A12P48065 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SLC6A12P48065 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SLC6A12P48065 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC6A12P48065 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC6A12P48065 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC6A12P48065 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC6A12P48065 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC6A12P48065 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
SLC6A12P48065 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC6A12P48065 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC6A12P48065 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC6A12P48065 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC6A12P48065 KRT8P50-201ENST00000562022 1438 ntBASIC18.01■□□□□ 0.47
SLC6A12P48065 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
SLC6A12P48065 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC6A12P48065 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC6A12P48065 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SLC6A12P48065 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC6A12P48065 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC6A12P48065 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC6A12P48065 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC6A12P48065 EGLN1P1-201ENST00000531623 762 ntBASIC18.01■□□□□ 0.47
SLC6A12P48065 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.01■□□□□ 0.47
SLC6A12P48065 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC6A12P48065 AC010947.1-201ENST00000623454 693 ntBASIC18.01■□□□□ 0.47
SLC6A12P48065 AC010653.2-201ENST00000623505 997 ntBASIC18.01■□□□□ 0.47
SLC6A12P48065 AC066615.1-201ENST00000640911 628 ntBASIC18.01■□□□□ 0.47
SLC6A12P48065 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC6A12P48065 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC6A12P48065 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
SLC6A12P48065 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC6A12P48065 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC6A12P48065 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
SLC6A12P48065 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC6A12P48065 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC6A12P48065 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC6A12P48065 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC6A12P48065 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC6A12P48065 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC6A12P48065 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC6A12P48065 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC6A12P48065 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18■□□□□ 0.47
SLC6A12P48065 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC6A12P48065 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18■□□□□ 0.47
SLC6A12P48065 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC6A12P48065 INGX-201ENST00000359239 846 ntBASIC18■□□□□ 0.47
SLC6A12P48065 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18■□□□□ 0.47
SLC6A12P48065 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SLC6A12P48065 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18■□□□□ 0.47
SLC6A12P48065 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18■□□□□ 0.47
SLC6A12P48065 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18■□□□□ 0.47
SLC6A12P48065 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC6A12P48065 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SLC6A12P48065 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC6A12P48065 AL354751.1-201ENST00000412768 1863 ntBASIC18■□□□□ 0.47
SLC6A12P48065 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SLC6A12P48065 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC6A12P48065 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC6A12P48065 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC6A12P48065 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SLC6A12P48065 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC6A12P48065 AL162741.1-201ENST00000565563 1558 ntBASIC18■□□□□ 0.47
SLC6A12P48065 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SLC6A12P48065 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.99■□□□□ 0.47
SLC6A12P48065 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC6A12P48065 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC6A12P48065 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC6A12P48065 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SLC6A12P48065 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SLC6A12P48065 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms