Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.46■□□□□ 0.71
MMP13P45452 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
MMP13P45452 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
MMP13P45452 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP13P45452 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP13P45452 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.45■□□□□ 0.7
MMP13P45452 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
MMP13P45452 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP13P45452 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.45■□□□□ 0.7
MMP13P45452 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.45■□□□□ 0.7
MMP13P45452 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MMP13P45452 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.45■□□□□ 0.7
MMP13P45452 AP003071.4-201ENST00000562276 1284 ntBASIC19.45■□□□□ 0.7
MMP13P45452 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.45■□□□□ 0.7
MMP13P45452 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
MMP13P45452 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MMP13P45452 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP13P45452 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP13P45452 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP13P45452 AC067852.2-201ENST00000590513 2313 ntBASIC19.45■□□□□ 0.7
MMP13P45452 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MMP13P45452 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MMP13P45452 IRX1P1-201ENST00000438849 1838 ntBASIC19.44■□□□□ 0.7
MMP13P45452 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.44■□□□□ 0.7
MMP13P45452 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MMP13P45452 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.44■□□□□ 0.7
MMP13P45452 KRT8P11-201ENST00000409686 1436 ntBASIC19.44■□□□□ 0.7
MMP13P45452 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
MMP13P45452 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
MMP13P45452 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MMP13P45452 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MMP13P45452 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MMP13P45452 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.44■□□□□ 0.7
MMP13P45452 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MMP13P45452 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.44■□□□□ 0.7
MMP13P45452 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.44■□□□□ 0.7
MMP13P45452 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.44■□□□□ 0.7
MMP13P45452 MIR4497-201ENST00000583208 89 ntBASIC19.44■□□□□ 0.7
MMP13P45452 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MMP13P45452 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MMP13P45452 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MMP13P45452 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.44■□□□□ 0.7
MMP13P45452 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
MMP13P45452 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.44■□□□□ 0.7
MMP13P45452 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MMP13P45452 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
MMP13P45452 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MMP13P45452 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MMP13P45452 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
MMP13P45452 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.43■□□□□ 0.7
MMP13P45452 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
MMP13P45452 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
MMP13P45452 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.43■□□□□ 0.7
MMP13P45452 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.43■□□□□ 0.7
MMP13P45452 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MMP13P45452 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MMP13P45452 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MMP13P45452 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.43■□□□□ 0.7
MMP13P45452 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
MMP13P45452 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MMP13P45452 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MMP13P45452 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
MMP13P45452 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.43■□□□□ 0.7
MMP13P45452 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
MMP13P45452 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MMP13P45452 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MMP13P45452 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
MMP13P45452 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MMP13P45452 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MMP13P45452 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MMP13P45452 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MMP13P45452 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.43■□□□□ 0.7
MMP13P45452 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MMP13P45452 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
MMP13P45452 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.42■□□□□ 0.7
MMP13P45452 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MMP13P45452 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.42■□□□□ 0.7
MMP13P45452 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.42■□□□□ 0.7
MMP13P45452 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MMP13P45452 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MMP13P45452 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.42■□□□□ 0.7
MMP13P45452 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.42■□□□□ 0.7
MMP13P45452 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MMP13P45452 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MMP13P45452 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
MMP13P45452 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MMP13P45452 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.42■□□□□ 0.7
MMP13P45452 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MMP13P45452 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
MMP13P45452 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MMP13P45452 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MMP13P45452 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
MMP13P45452 PRSS44-201ENST00000515154 1146 ntBASIC19.42■□□□□ 0.7
MMP13P45452 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MMP13P45452 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.42■□□□□ 0.7
MMP13P45452 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
MMP13P45452 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MMP13P45452 AP000692.2-201ENST00000608391 879 ntBASIC19.42■□□□□ 0.7
MMP13P45452 DGCR10-201ENST00000609839 495 ntBASIC19.42■□□□□ 0.7
MMP13P45452 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms