Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
MTHFRP42898 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.54■□□□□ 0.72
MTHFRP42898 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MTHFRP42898 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MTHFRP42898 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MTHFRP42898 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.53■□□□□ 0.72
MTHFRP42898 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
MTHFRP42898 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MTHFRP42898 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MTHFRP42898 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MTHFRP42898 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.53■□□□□ 0.72
MTHFRP42898 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.53■□□□□ 0.72
MTHFRP42898 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MTHFRP42898 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.53■□□□□ 0.72
MTHFRP42898 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MTHFRP42898 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.53■□□□□ 0.72
MTHFRP42898 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MTHFRP42898 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
MTHFRP42898 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.53■□□□□ 0.72
MTHFRP42898 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.53■□□□□ 0.72
MTHFRP42898 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.53■□□□□ 0.72
MTHFRP42898 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.53■□□□□ 0.72
MTHFRP42898 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.53■□□□□ 0.72
MTHFRP42898 AL390719.2-201ENST00000606993 987 ntBASIC19.53■□□□□ 0.72
MTHFRP42898 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MTHFRP42898 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MTHFRP42898 AC233702.3-201ENST00000578656 1387 ntBASIC19.53■□□□□ 0.72
MTHFRP42898 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MTHFRP42898 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MTHFRP42898 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MTHFRP42898 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MTHFRP42898 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MTHFRP42898 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.53■□□□□ 0.72
MTHFRP42898 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MTHFRP42898 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MTHFRP42898 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.53■□□□□ 0.72
MTHFRP42898 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
MTHFRP42898 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
MTHFRP42898 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MTHFRP42898 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
MTHFRP42898 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MTHFRP42898 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
MTHFRP42898 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MTHFRP42898 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.52■□□□□ 0.72
MTHFRP42898 KRT16P4-201ENST00000453883 522 ntBASIC19.52■□□□□ 0.72
MTHFRP42898 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MTHFRP42898 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.52■□□□□ 0.72
MTHFRP42898 AC099336.1-202ENST00000602961 463 ntBASIC19.52■□□□□ 0.72
MTHFRP42898 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
MTHFRP42898 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
MTHFRP42898 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
MTHFRP42898 AL162377.1-201ENST00000618844 1793 ntBASIC19.52■□□□□ 0.71
MTHFRP42898 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
MTHFRP42898 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
MTHFRP42898 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
MTHFRP42898 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MTHFRP42898 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MTHFRP42898 LINC00167-201ENST00000530583 1419 ntBASIC19.51■□□□□ 0.71
MTHFRP42898 HOXB1-202ENST00000577092 1414 ntBASIC19.51■□□□□ 0.71
MTHFRP42898 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
MTHFRP42898 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
MTHFRP42898 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
MTHFRP42898 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MTHFRP42898 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
MTHFRP42898 AIRN-201ENST00000601203 4374 ntBASIC19.51■□□□□ 0.71
MTHFRP42898 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MTHFRP42898 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MTHFRP42898 MRPL3P1-201ENST00000400109 1033 ntBASIC19.51■□□□□ 0.71
MTHFRP42898 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.51■□□□□ 0.71
MTHFRP42898 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MTHFRP42898 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
MTHFRP42898 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.51■□□□□ 0.71
MTHFRP42898 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
MTHFRP42898 BX640515.1-201ENST00000617215 977 ntBASIC19.51■□□□□ 0.71
MTHFRP42898 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MTHFRP42898 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MTHFRP42898 AL109659.2-201ENST00000606809 1674 ntBASIC19.51■□□□□ 0.71
MTHFRP42898 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MTHFRP42898 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.51■□□□□ 0.71
MTHFRP42898 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MTHFRP42898 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
MTHFRP42898 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MTHFRP42898 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
MTHFRP42898 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.51■□□□□ 0.71
MTHFRP42898 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MTHFRP42898 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MTHFRP42898 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.5■□□□□ 0.71
MTHFRP42898 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.5■□□□□ 0.71
MTHFRP42898 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MTHFRP42898 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.5■□□□□ 0.71
MTHFRP42898 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MTHFRP42898 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MTHFRP42898 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.5■□□□□ 0.71
MTHFRP42898 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.5■□□□□ 0.71
MTHFRP42898 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.5■□□□□ 0.71
MTHFRP42898 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
MTHFRP42898 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.5■□□□□ 0.71
MTHFRP42898 AC120114.3-201ENST00000611923 658 ntBASIC19.5■□□□□ 0.71
MTHFRP42898 AC117500.6-201ENST00000624871 588 ntBASIC19.5■□□□□ 0.71
MTHFRP42898 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms