Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USP8P40818 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP8P40818 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP8P40818 AC008040.2-201ENST00000461049 708 ntBASIC20.34■□□□□ 0.85
USP8P40818 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.34■□□□□ 0.85
USP8P40818 TMEM191A-211ENST00000637163 1067 ntBASIC20.34■□□□□ 0.85
USP8P40818 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP8P40818 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
USP8P40818 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.34■□□□□ 0.85
USP8P40818 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.34■□□□□ 0.85
USP8P40818 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP8P40818 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP8P40818 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP8P40818 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP8P40818 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
USP8P40818 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
USP8P40818 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP8P40818 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP8P40818 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.33■□□□□ 0.85
USP8P40818 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP8P40818 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
USP8P40818 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
USP8P40818 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
USP8P40818 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
USP8P40818 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP8P40818 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP8P40818 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
USP8P40818 RPS2P55-201ENST00000397318 883 ntBASIC20.33■□□□□ 0.85
USP8P40818 FAM207BP-201ENST00000447172 505 ntBASIC20.33■□□□□ 0.85
USP8P40818 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
USP8P40818 AC107956.1-201ENST00000494359 873 ntBASIC20.33■□□□□ 0.85
USP8P40818 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.33■□□□□ 0.85
USP8P40818 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
USP8P40818 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.33■□□□□ 0.85
USP8P40818 AC026271.3-201ENST00000571884 352 ntBASIC20.33■□□□□ 0.85
USP8P40818 MIR6786-201ENST00000616843 113 ntBASIC20.33■□□□□ 0.85
USP8P40818 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP8P40818 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
USP8P40818 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
USP8P40818 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP8P40818 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
USP8P40818 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP8P40818 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP8P40818 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.33■□□□□ 0.84
USP8P40818 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP8P40818 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP8P40818 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP8P40818 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP8P40818 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP8P40818 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
USP8P40818 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP8P40818 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP8P40818 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP8P40818 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
USP8P40818 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP8P40818 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
USP8P40818 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.32■□□□□ 0.84
USP8P40818 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP8P40818 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP8P40818 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP8P40818 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.32■□□□□ 0.84
USP8P40818 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
USP8P40818 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.32■□□□□ 0.84
USP8P40818 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP8P40818 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.32■□□□□ 0.84
USP8P40818 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.32■□□□□ 0.84
USP8P40818 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.32■□□□□ 0.84
USP8P40818 AC130371.2-201ENST00000619443 611 ntBASIC20.32■□□□□ 0.84
USP8P40818 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP8P40818 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP8P40818 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP8P40818 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.32■□□□□ 0.84
USP8P40818 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP8P40818 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP8P40818 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.32■□□□□ 0.84
USP8P40818 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
USP8P40818 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.32■□□□□ 0.84
USP8P40818 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP8P40818 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
USP8P40818 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
USP8P40818 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.31■□□□□ 0.84
USP8P40818 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.31■□□□□ 0.84
USP8P40818 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP8P40818 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
USP8P40818 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP8P40818 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
USP8P40818 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
USP8P40818 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
USP8P40818 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP8P40818 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP8P40818 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.31■□□□□ 0.84
USP8P40818 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.31■□□□□ 0.84
USP8P40818 B3GAT3P1-201ENST00000471720 806 ntBASIC20.31■□□□□ 0.84
USP8P40818 PRSS44-201ENST00000515154 1146 ntBASIC20.31■□□□□ 0.84
USP8P40818 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.31■□□□□ 0.84
USP8P40818 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.31■□□□□ 0.84
USP8P40818 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.31■□□□□ 0.84
USP8P40818 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP8P40818 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
USP8P40818 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms