Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CTNNA1P35221 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.75■□□□□ 0.75
CTNNA1P35221 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTNNA1P35221 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CTNNA1P35221 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.75■□□□□ 0.75
CTNNA1P35221 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTNNA1P35221 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTNNA1P35221 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTNNA1P35221 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTNNA1P35221 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.75■□□□□ 0.75
CTNNA1P35221 AC133681.1-201ENST00000465482 601 ntBASIC19.75■□□□□ 0.75
CTNNA1P35221 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.75■□□□□ 0.75
CTNNA1P35221 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CTNNA1P35221 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.75■□□□□ 0.75
CTNNA1P35221 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.75■□□□□ 0.75
CTNNA1P35221 AC124016.1-201ENST00000609552 612 ntBASIC19.75■□□□□ 0.75
CTNNA1P35221 AC068587.9-201ENST00000641814 219 ntBASIC19.75■□□□□ 0.75
CTNNA1P35221 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTNNA1P35221 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CTNNA1P35221 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTNNA1P35221 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTNNA1P35221 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CTNNA1P35221 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTNNA1P35221 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTNNA1P35221 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CTNNA1P35221 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CTNNA1P35221 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.75■□□□□ 0.75
CTNNA1P35221 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTNNA1P35221 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTNNA1P35221 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNA1P35221 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CTNNA1P35221 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CTNNA1P35221 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.74■□□□□ 0.75
CTNNA1P35221 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNA1P35221 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.74■□□□□ 0.75
CTNNA1P35221 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNA1P35221 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNA1P35221 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNA1P35221 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNA1P35221 ID1-201ENST00000376105 1233 ntBASIC19.74■□□□□ 0.75
CTNNA1P35221 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.74■□□□□ 0.75
CTNNA1P35221 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
CTNNA1P35221 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.74■□□□□ 0.75
CTNNA1P35221 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
CTNNA1P35221 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.74■□□□□ 0.75
CTNNA1P35221 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CTNNA1P35221 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNA1P35221 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.74■□□□□ 0.75
CTNNA1P35221 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CTNNA1P35221 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNA1P35221 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNA1P35221 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNA1P35221 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNA1P35221 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.74■□□□□ 0.75
CTNNA1P35221 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNA1P35221 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
CTNNA1P35221 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNA1P35221 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CTNNA1P35221 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNA1P35221 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNA1P35221 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNA1P35221 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTNNA1P35221 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.73■□□□□ 0.75
CTNNA1P35221 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTNNA1P35221 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTNNA1P35221 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTNNA1P35221 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CTNNA1P35221 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTNNA1P35221 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.73■□□□□ 0.75
CTNNA1P35221 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CTNNA1P35221 AC004980.1-204ENST00000429707 299 ntBASIC19.73■□□□□ 0.75
CTNNA1P35221 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CTNNA1P35221 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTNNA1P35221 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTNNA1P35221 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTNNA1P35221 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTNNA1P35221 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTNNA1P35221 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CTNNA1P35221 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTNNA1P35221 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.73■□□□□ 0.75
CTNNA1P35221 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
CTNNA1P35221 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTNNA1P35221 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTNNA1P35221 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNNA1P35221 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNNA1P35221 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNNA1P35221 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNNA1P35221 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTNNA1P35221 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNNA1P35221 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNNA1P35221 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTNNA1P35221 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTNNA1P35221 NIFKP9-201ENST00000419265 221 ntBASIC19.72■□□□□ 0.75
CTNNA1P35221 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CTNNA1P35221 PRSS44-201ENST00000515154 1146 ntBASIC19.72■□□□□ 0.75
CTNNA1P35221 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.72■□□□□ 0.75
CTNNA1P35221 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.72■□□□□ 0.75
CTNNA1P35221 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.72■□□□□ 0.75
CTNNA1P35221 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.72■□□□□ 0.75
CTNNA1P35221 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms