Protein–RNA interactions for Protein: P30511

HLA-F, HLA class I histocompatibility antigen, alpha chain F, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-FP30511 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.97■□□□□ 0.63
HLA-FP30511 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.97■□□□□ 0.63
HLA-FP30511 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.97■□□□□ 0.63
HLA-FP30511 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
HLA-FP30511 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-FP30511 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-FP30511 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-FP30511 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-FP30511 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.97■□□□□ 0.63
HLA-FP30511 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.97■□□□□ 0.63
HLA-FP30511 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HLA-FP30511 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-FP30511 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-FP30511 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-FP30511 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.97■□□□□ 0.63
HLA-FP30511 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-FP30511 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.97■□□□□ 0.63
HLA-FP30511 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.97■□□□□ 0.63
HLA-FP30511 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-FP30511 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-FP30511 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-FP30511 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.96■□□□□ 0.63
HLA-FP30511 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.96■□□□□ 0.63
HLA-FP30511 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-FP30511 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-FP30511 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-FP30511 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-FP30511 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-FP30511 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-FP30511 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.96■□□□□ 0.63
HLA-FP30511 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.96■□□□□ 0.63
HLA-FP30511 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.96■□□□□ 0.63
HLA-FP30511 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.96■□□□□ 0.63
HLA-FP30511 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
HLA-FP30511 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-FP30511 AC083906.6-201ENST00000641366 219 ntBASIC18.96■□□□□ 0.63
HLA-FP30511 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-FP30511 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-FP30511 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-FP30511 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
HLA-FP30511 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-FP30511 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.96■□□□□ 0.63
HLA-FP30511 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
HLA-FP30511 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-FP30511 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-FP30511 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-FP30511 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-FP30511 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-FP30511 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.95■□□□□ 0.62
HLA-FP30511 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-FP30511 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-FP30511 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-FP30511 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-FP30511 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-FP30511 AL162741.1-201ENST00000565563 1558 ntBASIC18.95■□□□□ 0.62
HLA-FP30511 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-FP30511 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.95■□□□□ 0.62
HLA-FP30511 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
HLA-FP30511 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.95■□□□□ 0.62
HLA-FP30511 MIR3180-4-201ENST00000582223 153 ntBASIC18.95■□□□□ 0.62
HLA-FP30511 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
HLA-FP30511 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-FP30511 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-FP30511 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.95■□□□□ 0.62
HLA-FP30511 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-FP30511 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
HLA-FP30511 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HLA-FP30511 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-FP30511 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-FP30511 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-FP30511 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-FP30511 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.95■□□□□ 0.62
HLA-FP30511 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-FP30511 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-FP30511 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.95■□□□□ 0.62
HLA-FP30511 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-FP30511 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-FP30511 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
HLA-FP30511 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-FP30511 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-FP30511 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.94■□□□□ 0.62
HLA-FP30511 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
HLA-FP30511 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-FP30511 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.94■□□□□ 0.62
HLA-FP30511 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-FP30511 MIR662-201ENST00000384847 95 ntBASIC18.94■□□□□ 0.62
HLA-FP30511 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-FP30511 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.94■□□□□ 0.62
HLA-FP30511 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.94■□□□□ 0.62
HLA-FP30511 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.94■□□□□ 0.62
HLA-FP30511 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.94■□□□□ 0.62
HLA-FP30511 AC011498.5-201ENST00000592027 486 ntBASIC18.94■□□□□ 0.62
HLA-FP30511 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.94■□□□□ 0.62
HLA-FP30511 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-FP30511 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.94■□□□□ 0.62
HLA-FP30511 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
HLA-FP30511 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
HLA-FP30511 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.94■□□□□ 0.62
HLA-FP30511 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.94■□□□□ 0.62
HLA-FP30511 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms