Protein–RNA interactions for Protein: P28749

RBL1, Retinoblastoma-like protein 1, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBL1P28749 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RBL1P28749 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RBL1P28749 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.19■□□□□ 0.66
RBL1P28749 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.18■□□□□ 0.66
RBL1P28749 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.18■□□□□ 0.66
RBL1P28749 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RBL1P28749 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RBL1P28749 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RBL1P28749 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RBL1P28749 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RBL1P28749 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.18■□□□□ 0.66
RBL1P28749 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.18■□□□□ 0.66
RBL1P28749 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RBL1P28749 AC097488.1-201ENST00000507834 756 ntBASIC19.18■□□□□ 0.66
RBL1P28749 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.18■□□□□ 0.66
RBL1P28749 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.18■□□□□ 0.66
RBL1P28749 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.18■□□□□ 0.66
RBL1P28749 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RBL1P28749 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RBL1P28749 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RBL1P28749 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RBL1P28749 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RBL1P28749 AC008556.1-201ENST00000610908 2040 ntBASIC19.18■□□□□ 0.66
RBL1P28749 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.18■□□□□ 0.66
RBL1P28749 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RBL1P28749 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RBL1P28749 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RBL1P28749 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.18■□□□□ 0.66
RBL1P28749 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RBL1P28749 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RBL1P28749 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBL1P28749 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBL1P28749 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBL1P28749 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBL1P28749 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RBL1P28749 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBL1P28749 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
RBL1P28749 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBL1P28749 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RBL1P28749 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.17■□□□□ 0.66
RBL1P28749 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBL1P28749 AL355355.2-201ENST00000442321 338 ntBASIC19.17■□□□□ 0.66
RBL1P28749 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBL1P28749 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.17■□□□□ 0.66
RBL1P28749 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RBL1P28749 AC026471.5-201ENST00000615068 467 ntBASIC19.17■□□□□ 0.66
RBL1P28749 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.17■□□□□ 0.66
RBL1P28749 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RBL1P28749 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBL1P28749 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBL1P28749 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBL1P28749 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBL1P28749 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.17■□□□□ 0.66
RBL1P28749 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RBL1P28749 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.16■□□□□ 0.66
RBL1P28749 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBL1P28749 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBL1P28749 AL354751.1-201ENST00000412768 1863 ntBASIC19.16■□□□□ 0.66
RBL1P28749 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RBL1P28749 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBL1P28749 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBL1P28749 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBL1P28749 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.16■□□□□ 0.66
RBL1P28749 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.16■□□□□ 0.66
RBL1P28749 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.16■□□□□ 0.66
RBL1P28749 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.16■□□□□ 0.66
RBL1P28749 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBL1P28749 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.16■□□□□ 0.66
RBL1P28749 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.16■□□□□ 0.66
RBL1P28749 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.16■□□□□ 0.66
RBL1P28749 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.16■□□□□ 0.66
RBL1P28749 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBL1P28749 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
RBL1P28749 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RBL1P28749 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RBL1P28749 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.16■□□□□ 0.66
RBL1P28749 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBL1P28749 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBL1P28749 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBL1P28749 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBL1P28749 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RBL1P28749 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBL1P28749 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RBL1P28749 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RBL1P28749 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RBL1P28749 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RBL1P28749 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RBL1P28749 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RBL1P28749 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RBL1P28749 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.15■□□□□ 0.66
RBL1P28749 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RBL1P28749 AL109659.2-201ENST00000606809 1674 ntBASIC19.15■□□□□ 0.66
RBL1P28749 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RBL1P28749 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RBL1P28749 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.15■□□□□ 0.66
RBL1P28749 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RBL1P28749 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.15■□□□□ 0.66
RBL1P28749 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
RBL1P28749 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RBL1P28749 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms