Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PTPN3P26045 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN3P26045 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.06■□□□□ 0.64
PTPN3P26045 AC073592.3-201ENST00000625118 1834 ntBASIC19.06■□□□□ 0.64
PTPN3P26045 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN3P26045 KRT8P45-201ENST00000414328 1447 ntBASIC19.06■□□□□ 0.64
PTPN3P26045 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.06■□□□□ 0.64
PTPN3P26045 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN3P26045 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PTPN3P26045 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
PTPN3P26045 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PTPN3P26045 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN3P26045 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PTPN3P26045 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
PTPN3P26045 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN3P26045 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN3P26045 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PTPN3P26045 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
PTPN3P26045 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.05■□□□□ 0.64
PTPN3P26045 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
PTPN3P26045 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.05■□□□□ 0.64
PTPN3P26045 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.05■□□□□ 0.64
PTPN3P26045 SLC25A1P2-201ENST00000430693 912 ntBASIC19.05■□□□□ 0.64
PTPN3P26045 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN3P26045 AC093827.2-201ENST00000512654 315 ntBASIC19.05■□□□□ 0.64
PTPN3P26045 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.05■□□□□ 0.64
PTPN3P26045 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PTPN3P26045 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN3P26045 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PTPN3P26045 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN3P26045 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN3P26045 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN3P26045 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN3P26045 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN3P26045 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.05■□□□□ 0.64
PTPN3P26045 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN3P26045 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN3P26045 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN3P26045 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN3P26045 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.04■□□□□ 0.64
PTPN3P26045 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN3P26045 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PTPN3P26045 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN3P26045 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN3P26045 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN3P26045 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN3P26045 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PTPN3P26045 MIR564-202ENST00000385049 94 ntBASIC19.04■□□□□ 0.64
PTPN3P26045 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN3P26045 AL596275.1-201ENST00000423464 877 ntBASIC19.04■□□□□ 0.64
PTPN3P26045 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.04■□□□□ 0.64
PTPN3P26045 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.04■□□□□ 0.64
PTPN3P26045 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.04■□□□□ 0.64
PTPN3P26045 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PTPN3P26045 AL353719.1-201ENST00000566847 864 ntBASIC19.04■□□□□ 0.64
PTPN3P26045 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.04■□□□□ 0.64
PTPN3P26045 AC066615.1-201ENST00000640911 628 ntBASIC19.04■□□□□ 0.64
PTPN3P26045 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PTPN3P26045 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN3P26045 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.04■□□□□ 0.64
PTPN3P26045 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.04■□□□□ 0.64
PTPN3P26045 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN3P26045 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN3P26045 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN3P26045 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.04■□□□□ 0.64
PTPN3P26045 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN3P26045 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN3P26045 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.03■□□□□ 0.64
PTPN3P26045 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN3P26045 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN3P26045 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN3P26045 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN3P26045 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PTPN3P26045 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN3P26045 AC112777.1-201ENST00000540175 1423 ntBASIC19.03■□□□□ 0.64
PTPN3P26045 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN3P26045 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN3P26045 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN3P26045 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
PTPN3P26045 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.03■□□□□ 0.64
PTPN3P26045 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN3P26045 AP003041.3-201ENST00000527151 707 ntBASIC19.03■□□□□ 0.64
PTPN3P26045 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.03■□□□□ 0.64
PTPN3P26045 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN3P26045 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN3P26045 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.03■□□□□ 0.64
PTPN3P26045 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN3P26045 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN3P26045 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PTPN3P26045 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN3P26045 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PTPN3P26045 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN3P26045 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.03■□□□□ 0.64
PTPN3P26045 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.03■□□□□ 0.64
PTPN3P26045 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN3P26045 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.02■□□□□ 0.64
PTPN3P26045 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN3P26045 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN3P26045 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN3P26045 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms