Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6GP18545 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC11.57□□□□□ -0.56
PDE6GP18545 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6GP18545 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6GP18545 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6GP18545 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
PDE6GP18545 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC11.57□□□□□ -0.56
PDE6GP18545 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC11.57□□□□□ -0.56
PDE6GP18545 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC11.57□□□□□ -0.56
PDE6GP18545 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
PDE6GP18545 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
PDE6GP18545 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6GP18545 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6GP18545 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6GP18545 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6GP18545 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6GP18545 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6GP18545 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6GP18545 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6GP18545 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC11.57□□□□□ -0.56
PDE6GP18545 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6GP18545 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6GP18545 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6GP18545 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
PDE6GP18545 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6GP18545 AL023806.1-201ENST00000603994 1649 ntBASIC11.57□□□□□ -0.56
PDE6GP18545 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC11.56□□□□□ -0.56
PDE6GP18545 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6GP18545 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6GP18545 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6GP18545 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6GP18545 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
PDE6GP18545 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6GP18545 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6GP18545 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
PDE6GP18545 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6GP18545 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC11.56□□□□□ -0.56
PDE6GP18545 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
PDE6GP18545 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
PDE6GP18545 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6GP18545 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6GP18545 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6GP18545 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6GP18545 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
PDE6GP18545 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6GP18545 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6GP18545 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC11.56□□□□□ -0.56
PDE6GP18545 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC11.56□□□□□ -0.56
PDE6GP18545 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6GP18545 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6GP18545 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6GP18545 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC11.56□□□□□ -0.56
PDE6GP18545 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6GP18545 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC11.56□□□□□ -0.56
PDE6GP18545 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC11.56□□□□□ -0.56
PDE6GP18545 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6GP18545 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC11.56□□□□□ -0.56
PDE6GP18545 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
PDE6GP18545 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6GP18545 AL139384.1-201ENST00000612143 3047 ntBASIC11.56□□□□□ -0.56
PDE6GP18545 KRT87P-202ENST00000534226 1464 ntBASIC11.56□□□□□ -0.56
PDE6GP18545 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6GP18545 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6GP18545 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6GP18545 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC11.56□□□□□ -0.56
PDE6GP18545 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PDE6GP18545 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
PDE6GP18545 FLJ13224-201ENST00000313737 1514 ntBASIC11.55□□□□□ -0.56
PDE6GP18545 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
PDE6GP18545 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
PDE6GP18545 AC138969.2-201ENST00000532739 9932 ntBASIC11.55□□□□□ -0.56
PDE6GP18545 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PDE6GP18545 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PDE6GP18545 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PDE6GP18545 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC11.55□□□□□ -0.56
PDE6GP18545 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC11.55□□□□□ -0.56
PDE6GP18545 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
PDE6GP18545 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC11.55□□□□□ -0.56
PDE6GP18545 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
PDE6GP18545 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PDE6GP18545 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC11.55□□□□□ -0.56
PDE6GP18545 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC11.55□□□□□ -0.56
PDE6GP18545 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PDE6GP18545 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
PDE6GP18545 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
PDE6GP18545 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PDE6GP18545 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PDE6GP18545 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
PDE6GP18545 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC11.55□□□□□ -0.56
PDE6GP18545 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
PDE6GP18545 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC11.55□□□□□ -0.56
PDE6GP18545 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PDE6GP18545 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PDE6GP18545 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC11.55□□□□□ -0.56
PDE6GP18545 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
PDE6GP18545 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC11.55□□□□□ -0.56
PDE6GP18545 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC11.55□□□□□ -0.56
PDE6GP18545 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
PDE6GP18545 LINC01126-201ENST00000623515 1646 ntBASIC11.55□□□□□ -0.56
PDE6GP18545 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms