Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.79■□□□□ 0.92
SMPD1P17405 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.79■□□□□ 0.92
SMPD1P17405 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMPD1P17405 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMPD1P17405 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMPD1P17405 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMPD1P17405 Z98044.1-201ENST00000632503 1764 ntBASIC20.79■□□□□ 0.92
SMPD1P17405 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.79■□□□□ 0.92
SMPD1P17405 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMPD1P17405 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMPD1P17405 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.78■□□□□ 0.92
SMPD1P17405 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.78■□□□□ 0.92
SMPD1P17405 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMPD1P17405 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SMPD1P17405 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMPD1P17405 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SMPD1P17405 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SMPD1P17405 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SMPD1P17405 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMPD1P17405 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMPD1P17405 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMPD1P17405 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMPD1P17405 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.78■□□□□ 0.92
SMPD1P17405 IGHV3-47-201ENST00000425060 335 ntBASIC20.78■□□□□ 0.92
SMPD1P17405 RN7SL606P-201ENST00000472779 293 ntBASIC20.78■□□□□ 0.92
SMPD1P17405 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.78■□□□□ 0.92
SMPD1P17405 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.78■□□□□ 0.92
SMPD1P17405 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.78■□□□□ 0.92
SMPD1P17405 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
SMPD1P17405 AC124864.1-201ENST00000623408 392 ntBASIC20.78■□□□□ 0.92
SMPD1P17405 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.78■□□□□ 0.92
SMPD1P17405 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.78■□□□□ 0.92
SMPD1P17405 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMPD1P17405 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMPD1P17405 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMPD1P17405 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.77■□□□□ 0.92
SMPD1P17405 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMPD1P17405 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMPD1P17405 AL357033.4-201ENST00000617703 1807 ntBASIC20.77■□□□□ 0.92
SMPD1P17405 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMPD1P17405 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.77■□□□□ 0.92
SMPD1P17405 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.77■□□□□ 0.92
SMPD1P17405 LINC01711-201ENST00000598340 967 ntBASIC20.77■□□□□ 0.92
SMPD1P17405 AC099336.1-202ENST00000602961 463 ntBASIC20.77■□□□□ 0.92
SMPD1P17405 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.77■□□□□ 0.92
SMPD1P17405 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.77■□□□□ 0.92
SMPD1P17405 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SMPD1P17405 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMPD1P17405 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SMPD1P17405 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SMPD1P17405 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMPD1P17405 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SMPD1P17405 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMPD1P17405 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMPD1P17405 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMPD1P17405 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.76■□□□□ 0.91
SMPD1P17405 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
SMPD1P17405 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.76■□□□□ 0.91
SMPD1P17405 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.76■□□□□ 0.91
SMPD1P17405 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMPD1P17405 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.76■□□□□ 0.91
SMPD1P17405 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.76■□□□□ 0.91
SMPD1P17405 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.76■□□□□ 0.91
SMPD1P17405 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.76■□□□□ 0.91
SMPD1P17405 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SMPD1P17405 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
SMPD1P17405 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SMPD1P17405 Z69720.1-201ENST00000601483 472 ntBASIC20.76■□□□□ 0.91
SMPD1P17405 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.76■□□□□ 0.91
SMPD1P17405 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMPD1P17405 KRT8P50-201ENST00000562022 1438 ntBASIC20.76■□□□□ 0.91
SMPD1P17405 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMPD1P17405 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.76■□□□□ 0.91
SMPD1P17405 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SMPD1P17405 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMPD1P17405 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
SMPD1P17405 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SMPD1P17405 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMPD1P17405 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SMPD1P17405 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMPD1P17405 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.75■□□□□ 0.91
SMPD1P17405 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMPD1P17405 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMPD1P17405 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.75■□□□□ 0.91
SMPD1P17405 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.75■□□□□ 0.91
SMPD1P17405 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMPD1P17405 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMPD1P17405 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.75■□□□□ 0.91
SMPD1P17405 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SMPD1P17405 GUSBP12-201ENST00000513727 720 ntBASIC20.75■□□□□ 0.91
SMPD1P17405 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMPD1P17405 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.75■□□□□ 0.91
SMPD1P17405 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.75■□□□□ 0.91
SMPD1P17405 AP005901.3-202ENST00000581653 237 ntBASIC20.75■□□□□ 0.91
SMPD1P17405 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.75■□□□□ 0.91
SMPD1P17405 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMPD1P17405 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.75■□□□□ 0.91
SMPD1P17405 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMPD1P17405 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMPD1P17405 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms