Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CCDC172P0C7W6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC172P0C7W6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CCDC172P0C7W6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC172P0C7W6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC172P0C7W6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC172P0C7W6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC172P0C7W6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC172P0C7W6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CCDC172P0C7W6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC172P0C7W6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.2■□□□□ 0.83
CCDC172P0C7W6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
CCDC172P0C7W6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC172P0C7W6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC172P0C7W6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC172P0C7W6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC172P0C7W6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CCDC172P0C7W6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC172P0C7W6 KRT8P32-201ENST00000512863 1461 ntBASIC20.2■□□□□ 0.82
CCDC172P0C7W6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CCDC172P0C7W6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC172P0C7W6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CCDC172P0C7W6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC172P0C7W6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC172P0C7W6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CCDC172P0C7W6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC172P0C7W6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC172P0C7W6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.2■□□□□ 0.82
CCDC172P0C7W6 RPPH1-201ENST00000516869 333 ntBASIC20.2■□□□□ 0.82
CCDC172P0C7W6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC172P0C7W6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC172P0C7W6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CCDC172P0C7W6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC172P0C7W6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC172P0C7W6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC172P0C7W6 CR392000.1-201ENST00000624770 1228 ntBASIC20.2■□□□□ 0.82
CCDC172P0C7W6 AC068587.9-201ENST00000641814 219 ntBASIC20.2■□□□□ 0.82
CCDC172P0C7W6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC172P0C7W6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC172P0C7W6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC172P0C7W6 AC073592.3-201ENST00000625118 1834 ntBASIC20.2■□□□□ 0.82
CCDC172P0C7W6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CCDC172P0C7W6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC172P0C7W6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC172P0C7W6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC172P0C7W6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC172P0C7W6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC172P0C7W6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC172P0C7W6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC172P0C7W6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC172P0C7W6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.19■□□□□ 0.82
CCDC172P0C7W6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC172P0C7W6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC172P0C7W6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC172P0C7W6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC172P0C7W6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CCDC172P0C7W6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
CCDC172P0C7W6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC172P0C7W6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC172P0C7W6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC172P0C7W6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC172P0C7W6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC172P0C7W6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CCDC172P0C7W6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC172P0C7W6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC172P0C7W6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC172P0C7W6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC172P0C7W6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC172P0C7W6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC172P0C7W6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC172P0C7W6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC172P0C7W6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC172P0C7W6 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC172P0C7W6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC172P0C7W6 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC172P0C7W6 AC135050.7-201ENST00000624508 2218 ntBASIC20.18■□□□□ 0.82
CCDC172P0C7W6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC172P0C7W6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
CCDC172P0C7W6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC172P0C7W6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC172P0C7W6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC172P0C7W6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CCDC172P0C7W6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CCDC172P0C7W6 AF186192.3-201ENST00000583427 947 ntBASIC20.18■□□□□ 0.82
CCDC172P0C7W6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC172P0C7W6 AC011298.2-201ENST00000617989 482 ntBASIC20.18■□□□□ 0.82
CCDC172P0C7W6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC172P0C7W6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC172P0C7W6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC172P0C7W6 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC172P0C7W6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.18■□□□□ 0.82
CCDC172P0C7W6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CCDC172P0C7W6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CCDC172P0C7W6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC172P0C7W6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC172P0C7W6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CCDC172P0C7W6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC172P0C7W6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CCDC172P0C7W6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC172P0C7W6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms