Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.38■□□□□ 0.69
CD48P09326 AP006294.2-201ENST00000641667 209 ntBASIC19.38■□□□□ 0.69
CD48P09326 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.38■□□□□ 0.69
CD48P09326 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CD48P09326 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.37■□□□□ 0.69
CD48P09326 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.37■□□□□ 0.69
CD48P09326 BICD1-207ENST00000551848 1962 ntBASIC19.37■□□□□ 0.69
CD48P09326 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD48P09326 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.37■□□□□ 0.69
CD48P09326 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CD48P09326 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.37■□□□□ 0.69
CD48P09326 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD48P09326 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD48P09326 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.37■□□□□ 0.69
CD48P09326 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD48P09326 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD48P09326 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CD48P09326 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD48P09326 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CD48P09326 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.37■□□□□ 0.69
CD48P09326 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.37■□□□□ 0.69
CD48P09326 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD48P09326 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD48P09326 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.37■□□□□ 0.69
CD48P09326 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CD48P09326 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.37■□□□□ 0.69
CD48P09326 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD48P09326 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD48P09326 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.37■□□□□ 0.69
CD48P09326 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD48P09326 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.37■□□□□ 0.69
CD48P09326 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD48P09326 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD48P09326 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD48P09326 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD48P09326 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD48P09326 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD48P09326 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD48P09326 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD48P09326 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD48P09326 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD48P09326 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.37■□□□□ 0.69
CD48P09326 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD48P09326 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CD48P09326 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD48P09326 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.36■□□□□ 0.69
CD48P09326 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD48P09326 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CD48P09326 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD48P09326 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD48P09326 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
CD48P09326 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CD48P09326 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.36■□□□□ 0.69
CD48P09326 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD48P09326 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.36■□□□□ 0.69
CD48P09326 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CD48P09326 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CD48P09326 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.36■□□□□ 0.69
CD48P09326 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.36■□□□□ 0.69
CD48P09326 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
CD48P09326 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CD48P09326 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.36■□□□□ 0.69
CD48P09326 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CD48P09326 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.36■□□□□ 0.69
CD48P09326 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD48P09326 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD48P09326 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CD48P09326 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
CD48P09326 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
CD48P09326 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD48P09326 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD48P09326 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD48P09326 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD48P09326 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD48P09326 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD48P09326 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD48P09326 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD48P09326 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD48P09326 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.35■□□□□ 0.69
CD48P09326 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD48P09326 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CD48P09326 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CD48P09326 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD48P09326 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.35■□□□□ 0.69
CD48P09326 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD48P09326 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD48P09326 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CD48P09326 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD48P09326 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CD48P09326 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.35■□□□□ 0.69
CD48P09326 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD48P09326 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CD48P09326 CA15P1-201ENST00000481698 905 ntBASIC19.35■□□□□ 0.69
CD48P09326 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CD48P09326 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CD48P09326 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD48P09326 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CD48P09326 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.35■□□□□ 0.69
CD48P09326 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CD48P09326 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms