Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MMP2P08253 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MMP2P08253 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.8■□□□□ 0.6
MMP2P08253 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.8■□□□□ 0.6
MMP2P08253 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP2P08253 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.8■□□□□ 0.6
MMP2P08253 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP2P08253 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MMP2P08253 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP2P08253 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MMP2P08253 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP2P08253 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.8■□□□□ 0.6
MMP2P08253 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.8■□□□□ 0.6
MMP2P08253 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP2P08253 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MMP2P08253 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MMP2P08253 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP2P08253 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP2P08253 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP2P08253 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP2P08253 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP2P08253 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP2P08253 AC073592.3-201ENST00000625118 1834 ntBASIC18.79■□□□□ 0.6
MMP2P08253 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP2P08253 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.79■□□□□ 0.6
MMP2P08253 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.79■□□□□ 0.6
MMP2P08253 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP2P08253 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
MMP2P08253 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP2P08253 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.79■□□□□ 0.6
MMP2P08253 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.79■□□□□ 0.6
MMP2P08253 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
MMP2P08253 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP2P08253 MYLKP1-201ENST00000509077 1580 ntBASIC18.79■□□□□ 0.6
MMP2P08253 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.79■□□□□ 0.6
MMP2P08253 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
MMP2P08253 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP2P08253 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP2P08253 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.79■□□□□ 0.6
MMP2P08253 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MMP2P08253 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP2P08253 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.79■□□□□ 0.6
MMP2P08253 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP2P08253 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP2P08253 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
MMP2P08253 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP2P08253 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP2P08253 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP2P08253 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MMP2P08253 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.78■□□□□ 0.6
MMP2P08253 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP2P08253 AC120498.9-201ENST00000339021 3867 ntBASIC18.78■□□□□ 0.6
MMP2P08253 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.78■□□□□ 0.6
MMP2P08253 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP2P08253 AC073508.3-201ENST00000619697 1419 ntBASIC18.78■□□□□ 0.6
MMP2P08253 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MMP2P08253 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.78■□□□□ 0.6
MMP2P08253 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP2P08253 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
MMP2P08253 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.78■□□□□ 0.6
MMP2P08253 AC113347.1-201ENST00000413321 391 ntBASIC18.78■□□□□ 0.6
MMP2P08253 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.78■□□□□ 0.6
MMP2P08253 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.78■□□□□ 0.6
MMP2P08253 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MMP2P08253 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP2P08253 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.78■□□□□ 0.6
MMP2P08253 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP2P08253 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
MMP2P08253 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MMP2P08253 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP2P08253 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP2P08253 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP2P08253 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
MMP2P08253 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
MMP2P08253 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
MMP2P08253 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.77■□□□□ 0.6
MMP2P08253 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MMP2P08253 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
MMP2P08253 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MMP2P08253 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
MMP2P08253 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MMP2P08253 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MMP2P08253 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.77■□□□□ 0.6
MMP2P08253 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MMP2P08253 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
MMP2P08253 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MMP2P08253 TERF1P1-201ENST00000311003 1181 ntBASIC18.77■□□□□ 0.6
MMP2P08253 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
MMP2P08253 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MMP2P08253 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MMP2P08253 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MMP2P08253 KRT18P23-201ENST00000435622 1283 ntBASIC18.77■□□□□ 0.6
MMP2P08253 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MMP2P08253 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.77■□□□□ 0.6
MMP2P08253 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.77■□□□□ 0.6
MMP2P08253 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.77■□□□□ 0.6
MMP2P08253 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.77■□□□□ 0.6
MMP2P08253 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.77■□□□□ 0.6
MMP2P08253 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.77■□□□□ 0.6
MMP2P08253 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms