Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.47■□□□□ 0.87
COL1A2P08123 AP003733.1-201ENST00000491725 852 ntBASIC20.47■□□□□ 0.87
COL1A2P08123 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL1A2P08123 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL1A2P08123 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL1A2P08123 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
COL1A2P08123 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL1A2P08123 KRT89P-201ENST00000620027 1478 ntBASIC20.47■□□□□ 0.87
COL1A2P08123 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL1A2P08123 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.47■□□□□ 0.87
COL1A2P08123 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL1A2P08123 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL1A2P08123 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL1A2P08123 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL1A2P08123 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
COL1A2P08123 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL1A2P08123 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.47■□□□□ 0.87
COL1A2P08123 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL1A2P08123 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.47■□□□□ 0.87
COL1A2P08123 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.47■□□□□ 0.87
COL1A2P08123 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.47■□□□□ 0.87
COL1A2P08123 AL049812.1-201ENST00000432563 2267 ntBASIC20.47■□□□□ 0.87
COL1A2P08123 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL1A2P08123 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL1A2P08123 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL1A2P08123 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.46■□□□□ 0.87
COL1A2P08123 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.46■□□□□ 0.87
COL1A2P08123 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.46■□□□□ 0.87
COL1A2P08123 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.46■□□□□ 0.87
COL1A2P08123 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.46■□□□□ 0.87
COL1A2P08123 AC092329.2-201ENST00000598402 547 ntBASIC20.46■□□□□ 0.87
COL1A2P08123 AC024563.2-201ENST00000603282 481 ntBASIC20.46■□□□□ 0.87
COL1A2P08123 AL390719.2-201ENST00000606993 987 ntBASIC20.46■□□□□ 0.87
COL1A2P08123 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.46■□□□□ 0.87
COL1A2P08123 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.46■□□□□ 0.87
COL1A2P08123 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.46■□□□□ 0.87
COL1A2P08123 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL1A2P08123 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL1A2P08123 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL1A2P08123 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL1A2P08123 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
COL1A2P08123 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL1A2P08123 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.46■□□□□ 0.87
COL1A2P08123 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL1A2P08123 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL1A2P08123 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
COL1A2P08123 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL1A2P08123 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
COL1A2P08123 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL1A2P08123 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.46■□□□□ 0.87
COL1A2P08123 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.46■□□□□ 0.87
COL1A2P08123 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL1A2P08123 GPR32P1-201ENST00000601788 811 ntBASIC20.46■□□□□ 0.87
COL1A2P08123 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL1A2P08123 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL1A2P08123 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL1A2P08123 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.45■□□□□ 0.86
COL1A2P08123 Z83836.1-201ENST00000624605 1642 ntBASIC20.45■□□□□ 0.86
COL1A2P08123 AL163051.1-201ENST00000569214 1512 ntBASIC20.45■□□□□ 0.86
COL1A2P08123 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL1A2P08123 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL1A2P08123 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.45■□□□□ 0.86
COL1A2P08123 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.45■□□□□ 0.86
COL1A2P08123 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL1A2P08123 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL1A2P08123 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
COL1A2P08123 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.45■□□□□ 0.86
COL1A2P08123 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL1A2P08123 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL1A2P08123 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL1A2P08123 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL1A2P08123 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.45■□□□□ 0.86
COL1A2P08123 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL1A2P08123 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL1A2P08123 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.45■□□□□ 0.86
COL1A2P08123 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
COL1A2P08123 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.45■□□□□ 0.86
COL1A2P08123 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
COL1A2P08123 AP002414.4-201ENST00000589764 1148 ntBASIC20.45■□□□□ 0.86
COL1A2P08123 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.45■□□□□ 0.86
COL1A2P08123 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL1A2P08123 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.45■□□□□ 0.86
COL1A2P08123 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL1A2P08123 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL1A2P08123 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL1A2P08123 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
COL1A2P08123 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL1A2P08123 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.44■□□□□ 0.86
COL1A2P08123 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL1A2P08123 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.44■□□□□ 0.86
COL1A2P08123 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL1A2P08123 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL1A2P08123 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.44■□□□□ 0.86
COL1A2P08123 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.44■□□□□ 0.86
COL1A2P08123 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
COL1A2P08123 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL1A2P08123 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL1A2P08123 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.44■□□□□ 0.86
COL1A2P08123 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.44■□□□□ 0.86
COL1A2P08123 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms